2MH5

Structure and NMR assignments of lantibiotic NAI-107 in DPC micelles

Structural Biology Knowledgebase: 2MH5 SBKB.org


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 80
  • Conformers Submitted: 20
  • Selection Criteria: Structures with the Least Restraint Violations

Literature

Macromolecules
Sequence Display for 2MH5

Classification: ANTIBIOTIC

Total Structure Weight: 25088.25

Macromolecule Entities
Molecule Chains Length Organism Details
Lantibiotic 107891 A 24 Microbispora sp. 107891 Mutation: S3X, T8X, S13X, S18X, S21X, C24X
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
DPV
Query on DPV

A dodecyl 2-(trimethylammonio)ethyl phosphate
dodecylphosphocholine (Synonym)
C17 H38 N O4 P
QBHFVMDLPTZDOI-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Biologically Interesting Molecules 1 Unique
ID Chains Name Type/Class 2D Diagram 3D Interactions
PRD_001219
Query on PRD_001219
A Lantibiotic 107891 Oligopeptide /
Antibiotic
Ligand Explorer

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 80
  • Conformers Submitted: 20
  • Selection Criteria: structures with the least restraint violations

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-11-18
  • Released Date: 2014-03-05
  • Deposition author(s): Munch, D., Muller, A., Schneider, T., Kohl, B., Wenzel, M., Bandow, J., Maffioli, S., Sosio, M., Donadio, S., Wimmer, R., Sahl, H.

Revision History

  • 2014-05-14
    Type: Citation | Details: Citation update
  • 2014-04-02
    Type: Citation | Details: Citation update