2MG8

Solution structure of TFF1 Estrogen Response Element complexed with DNA Bis-intercalating Anticancer Drug XR5944 (MLN944)

  • Classification: DNA
  • Deposited: 2013-10-30 Released: 2014-04-23
  • Deposition author(s): Lin, C.

Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 50
  • Conformers Submitted: 14
  • Selection Criteria: Structures with the Lowest Energy

Literature

Macromolecules
Sequence Display for 2MG8

Classification: DNA

Total Structure Weight: 10362.39

Macromolecule Entities
Molecule Chains Length Organism Details
5'-D(*AP*GP*GP*TP*CP*AP*CP*GP*GP*TP*GP*GP*CP*CP*A)-3' A 15 synthetic strand 1
5'-D(*TP*GP*GP*CP*CP*AP*CP*CP*GP*TP*GP*AP*CP*CP*T)-3' B 15 synthetic strand 2

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
XR2
Query on XR2

B 1-METHYL-9-[12-(9-METHYLPHENAZIN-10-IUM-1- YL)-12-OXO-2,11-DIAZA-5,8-DIAZONIADODEC-1- ANOYL]PHENAZIN-10-IUM
C34 H38 N8 O2
SFOADSRLCHRTKT-UHFFFAOYSA-R
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 50
  • Conformers Submitted: 14
  • Selection Criteria: structures with the lowest energy

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-10-30
  • Released Date: 2014-04-23
  • Deposition author(s): Lin, C.

Revision History

  • Version 1_0: 2014-04-23

    Type: Initial release

  • Version 1_1: 2014-06-04

    Type: Database references

  • Version 1_2: 2014-09-17

    Type: Other, Structure summary