2LL4

HADDOCK structure of TgMIC4-A5/lacto-N-biose complex, based on NOE-derived distance restraints


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 200
  • Conformers Submitted: 10
  • Selection Criteria: Structures with the Lowest Energy

Literature

Macromolecules
Sequence Display for 2LL4

Classification: CELL ADHESION

Total Structure Weight: 13171.87

Macromolecule Entities
Molecule Chains Length Organism Details
Micronemal protein 4 M 82 Toxoplasma gondii Fragment: Apple-5 domain residues 410-491
Gene Name(s): MIC4 TgIb.0680
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NAG
Query on NAG

M N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GAL
Query on GAL

M BETA-D-GALACTOSE
C6 H12 O6
WQZGKKKJIJFFOK-FPRJBGLDSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 200
  • Conformers Submitted: 10
  • Selection Criteria: structures with the lowest energy

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2011-10-26
  • Released Date: 2012-04-04
  • Deposition author(s): Cowper, B., Matthews, S.

Revision History

  • Version 1_0: 2012-04-04

    Type: Initial release

  • Version 1_1: 2012-05-30

    Type: Database references