2HK5

Hck Kinase in Complex with Lck targetted Inhibitor PG-1009247


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.250
  • R-Value Work: 0.198

Literature

Macromolecules
Sequence Display for 2HK5

Classification: TRANSFERASE

Total Structure Weight: 31402.36

Macromolecule Entities
Molecule Chains Length Organism Details
Tyrosine-protein kinase HCK A 270 Homo sapiens EC#: 2.7.10.2 IUBMB
Fragment: Kinase Domian (Residues 246-513)
Gene Name(s): HCK Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
1BM
Query on 1BM

A 3-{[2-(1H-BENZIMIDAZOL-1-YL)-6-{[2-(DIETHYLAMINO)ETHYL]AMINO}PYRIMIDIN- 4-YL]AMINO}-4-METHYLPHENOL
C24 H29 N7 O
OAILDJYOGMMAOQ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
1BM IC50: 46 nM (100) BindingDB

IC50: 46 nM  BindingMOAD
IC50: 46 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.250
  • R-Value Work: 0.198
  • Space Group: P 65

Unit Cell:

Length (Å) Angle (°)
a = 96.98 α = 90.00
b = 96.98 β = 90.00
c = 70.00 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2006-07-03
  • Released Date: 2006-09-05
  • Deposition author(s): Walter, R.L., Mekel, M.J., Evdokimov, A.G., Pokross, M.E., Sabat, M.P.

Revision History

  • Version 1_0: 2006-09-05

    Type: Initial release

  • Version 1_1: 2007-10-24

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance

  • Version 1_3: 2015-04-15

    Type: Database references

  • Version 1_4: 2017-10-18

    Type: Refinement description