2CNE
Structural Insights into the Design of Nonpeptidic Isothiazolidinone- Containing Inhibitors of Protein Tyrosine Phosphatase 1B
- PDB DOI: https://doi.org/10.2210/pdb2CNE/pdb
- Classification: HYDROLASE
- Organism(s): Homo sapiens
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No 
- Deposited: 2006-05-21 Released: 2006-09-27 
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.80 Å
- R-Value Free: 0.237 
- R-Value Work: 0.197 
wwPDB Validation   3D Report Full Report
This is version 1.5 of the entry. See complete history. 
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 1 | 304 | Homo sapiens | Mutation(s): 0  EC: 3.1.3.48 | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P18031 (Homo sapiens) Explore P18031  Go to UniProtKB:  P18031 | |||||
PHAROS:  P18031 GTEx:  ENSG00000196396  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P18031 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
Ligands 3 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
DFJ Query on DFJ | B [auth A] | N-({4-[DIFLUORO(PHOSPHONO)METHYL]PHENYL}ACETYL)-L-PHENYLALANYL-4-[DIFLUORO(PHOSPHONO)METHYL]-L-PHENYLALANINAMIDE C28 H29 F4 N3 O9 P2 LGZYIQKUXWAUAL-GOTSBHOMSA-N | |||
BOG Query on BOG | E [auth A] | octyl beta-D-glucopyranoside C14 H28 O6 HEGSGKPQLMEBJL-RKQHYHRCSA-N | |||
SO4 Query on SO4 | C [auth A], D [auth A] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.80 Å
- R-Value Free: 0.237 
- R-Value Work: 0.197 
- Space Group: P 21 21 21
Unit Cell:
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 62.11 | α = 90 |
b = 70.98 | β = 90 |
c = 83.78 | γ = 90 |
Software Name | Purpose |
---|---|
CNX | refinement |
CrystalClear | data reduction |
CrystalClear | data scaling |
CNX | phasing |
Entry History 
Deposition Data
- Released Date: 2006-09-27  Deposition Author(s): Ala, P.J., Gonneville, L., Hillman, M., Becker-Pasha, M., Yue, E.W., Douty, B., Wayland, B., Polam, P., Crawley, M.L., McLaughlin, E., Sparks, R.B., Glass, B., Takvorian, A., Combs, A.P., Burn, T.C., Hollis, G.F., Wynn, R.
Revision History (Full details and data files)
- Version 1.0: 2006-09-27
Type: Initial release - Version 1.1: 2011-05-08
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Version format compliance - Version 1.3: 2017-07-05
Changes: Data collection - Version 1.4: 2020-07-29
Type: Remediation
Reason: Carbohydrate remediation
Changes: Data collection, Derived calculations, Structure summary - Version 1.5: 2023-12-13
Changes: Data collection, Database references, Refinement description, Structure summary