2CFU

Crystal structure of SdsA1, an alkylsulfatase from Pseudomonas aeruginosa, in complex with 1-decane-sulfonic-acid.


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.217
  • R-Value Work: 0.171

Literature

Macromolecules
Sequence Display for 2CFU

Classification: HYDROLASE

Total Structure Weight: 73935.25

Macromolecule Entities
Molecule Chains Length Organism Details
SDSA1 A 658 Pseudomonas aeruginosa Gene Name(s): sdsA1 PA0740
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 4 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
1DB
Query on 1DB

A 1-DECANE-SULFONIC-ACID
DECANE-1-SULFONIC ACID (Synonym)
C10 H22 O3 S
KVGOXGQSTGQXDD-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
PEG
Query on PEG

A DI(HYDROXYETHYL)ETHER
C4 H10 O3
MTHSVFCYNBDYFN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ZN
Query on ZN

A ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
IPA
Query on IPA

A ISOPROPYL ALCOHOL
2-PROPANOL (Synonym)
C3 H8 O
KFZMGEQAYNKOFK-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.217
  • R-Value Work: 0.171
  • Space Group: P 65 2 2

Unit Cell:

Length (Å) Angle (°)
a = 86.06 α = 90.00
b = 86.06 β = 90.00
c = 364.41 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2006-02-23
  • Released Date: 2006-04-26
  • Deposition author(s): Hagelueken, G., Adams, T.M., Wiehlmann, L., Widow, U., Kolmar, H., Tuemmler, B., Heinz, D.W., Schubert, W.-D.

Revision History

  • Version 1_0: 2006-04-26

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Advisory, Version format compliance

  • Version 1_2: 2011-09-28

    Type: Atomic model, Database references, Derived calculations, Non-polymer description