2AS6

cytochrome c peroxidase in complex with cyclopentylamine


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.45 Å
  • R-Value Free: 0.183
  • R-Value Work: 0.142

Literature

Macromolecules
Sequence Display for 2AS6

Classification: OXIDOREDUCTASE

Total Structure Weight: 34159.89

Macromolecule Entities
Molecule Chains Length Organism Details
Cytochrome c peroxidase, mitochondrial A 294 Saccharomyces cerevisiae EC#: 1.11.1.5 IUBMB
Fragment: cytochrome c peroxidase
Mutation: T53I, D152G, W191G
Gene Name(s): CCP1 CCP CPO Gene View YKR066C
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
HEM
Query on HEM

A PROTOPORPHYRIN IX CONTAINING FE
HEME (Synonym)
C34 H32 Fe N4 O4
KABFMIBPWCXCRK-RGGAHWMASA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
1CB
Query on 1CB

A CYCLOPENTANAMINE
C5 H11 N
NISGSNTVMOOSJQ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.45 Å
  • R-Value Free: 0.183
  • R-Value Work: 0.142
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 51.13 α = 90.00
b = 75.72 β = 90.00
c = 106.90 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2005-08-22
  • Released Date: 2006-04-11
  • Deposition author(s): Brenk, R., Vetter, S.W., Boyce, S.E., Goodin, D.B., Shoichet, B.K.

Revision History

  • Version 1_0: 2006-04-11

    Type: Initial release

  • Version 1_1: 2008-04-30

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance