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30S ribosomal subunit with RsgA bound in the presence of GMPPNP
2YKR
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Ribosome/hydrolase
    Structure Weight: 800901.96
    Molecule: 16S RRNA
    Polymer: 1 Type: rna Length: 1533
    Chains: A
    Organism: Escherichia coli DH5[alpha]
    Molecule: 30S RIBOSOMAL PROTEIN S2
    Polymer: 2 Type: protein Length: 218
    Chains: B
    Fragment: RESIDUES 9-226
    Organism: Escherichia coli DH5[alpha]
    Gene Names: rpsB ECIAI39_0171
    UniProtKB: Protein Feature View | Search PDB | B7NID0  
    Molecule: 30S RIBOSOMAL PROTEIN S3
    Polymer: 3 Type: protein Length: 206
    Chains: C
    Fragment: RESIDUES 2-207
    Organism: Escherichia coli DH5[alpha]
    Gene Names: rpsC Ecok1_32980 APECO1_3136
    UniProtKB: Protein Feature View | Search PDB | A1AGK2  
    Molecule: 30S RIBOSOMAL PROTEIN S4
    Polymer: 4 Type: protein Length: 205
    Chains: D
    Fragment: RESIDUES 2-206
    Organism: Escherichia coli DH5[alpha]
    Gene Names: rpsD Ecok1_32830 APECO1_3151
    UniProtKB: Protein Feature View | Search PDB | A1AGI7  
    Molecule: 30S RIBOSOMAL PROTEIN S5
    Polymer: 5 Type: protein Length: 150
    Chains: E
    Fragment: RESIDUES 10-159
    Organism: Escherichia coli DH5[alpha]
    Gene Names: rpsE ECEG_03786
    UniProtKB: Protein Feature View | Search PDB | D6JG86  
    Molecule: 30S RIBOSOMAL PROTEIN S6
    Polymer: 6 Type: protein Length: 100
    Chains: F
    Fragment: RESIDUES 1-100
    Organism: Escherichia coli DH5[alpha]
    Gene Names: rpsF ECSE_4499
    UniProtKB: Protein Feature View | Search PDB | B6I2A6  
    Molecule: 30S RIBOSOMAL PROTEIN S7
    Polymer: 7 Type: protein Length: 151
    Chains: G
    Fragment: RESIDUES 2-152
    Organism: Escherichia coli DH5[alpha]
    Gene Names: rpsG EC236275_4183
    UniProtKB: Protein Feature View | Search PDB | E3XT25  
    Molecule: 30S RIBOSOMAL PROTEIN S8
    Polymer: 8 Type: protein Length: 129
    Chains: H
    Fragment: RESIDUES 2-130
    Organism: Escherichia coli DH5[alpha]
    Gene Names: rpsH ECSE_3581
    UniProtKB: Protein Feature View | Search PDB | B6I220  
    Molecule: 30S RIBOSOMAL PROTEIN S9
    Polymer: 9 Type: protein Length: 127
    Chains: I
    Fragment: RESIDUES 4-130
    Organism: Escherichia coli DH5[alpha]
    Gene Names: rpsI ECP_3313
    UniProtKB: Protein Feature View | Search PDB | Q0TCN6  
    Molecule: 30S RIBOSOMAL PROTEIN S10
    Polymer: 10 Type: protein Length: 98
    Chains: J
    Fragment: RESIDUES 5-102
    Organism: Escherichia coli DH5[alpha]
    Gene Names: rpsJ EcE24377A_3804
    UniProtKB: Protein Feature View | Search PDB | A7ZSL0  
    Molecule: 30S RIBOSOMAL PROTEIN S11
    Polymer: 11 Type: protein Length: 117
    Chains: K
    Fragment: RESIDUES 13-129
    Organism: Escherichia coli DH5[alpha]
    Gene Names: rpsK ECIAI1_3447
    UniProtKB: Protein Feature View | Search PDB | B7M103  
    Molecule: 30S RIBOSOMAL PROTEIN S12
    Polymer: 12 Type: protein Length: 123
    Chains: L
    Fragment: RESIDUES 2-124
    Organism: Escherichia coli DH5[alpha]
    Gene Names: rpsL strA c4116
    UniProtKB: Protein Feature View | Search PDB | P0A7S4  
    Molecule: 30S RIBOSOMAL PROTEIN S13
    Polymer: 13 Type: protein Length: 114
    Chains: M
    Fragment: RESIDUES 2-115
    Organism: Escherichia coli DH5[alpha]
    Gene Names: rpsM Ecok1_32850 APECO1_3149
    UniProtKB: Protein Feature View | Search PDB | A1AGI9  
    Molecule: 30S RIBOSOMAL PROTEIN S14
    Polymer: 14 Type: protein Length: 100
    Chains: N
    Fragment: RESIDUES 2-101
    Organism: Escherichia coli DH5[alpha]
    Gene Names: rpsN ECIAI1_3456
    UniProtKB: Protein Feature View | Search PDB | B7M1M1  
    Molecule: 30S RIBOSOMAL PROTEIN S15
    Polymer: 15 Type: protein Length: 88
    Chains: O
    Fragment: RESIDUES 2-89
    Organism: Escherichia coli DH5[alpha]
    Gene Names: rpsO EcB7A_4304
    UniProtKB: Protein Feature View | Search PDB | B3HGB0  
    Molecule: 30S RIBOSOMAL PROTEIN S16
    Polymer: 16 Type: protein Length: 82
    Chains: P
    Organism: Escherichia coli DH5[alpha]
    Gene Names: rpsP ECUMN_2934
    UniProtKB: Protein Feature View | Search PDB | B7N6J5  
    Molecule: 30S RIBOSOMAL PROTEIN S17
    Polymer: 17 Type: protein Length: 80
    Chains: Q
    Fragment: RESIDUES 4-83
    Organism: Escherichia coli DH5[alpha]
    Gene Names: rpsQ Z4681 ECs4176
    UniProtKB: Protein Feature View | Search PDB | P0AG65  
    Molecule: 30S RIBOSOMAL PROTEIN S18
    Polymer: 18 Type: protein Length: 55
    Chains: R
    Fragment: RESIDUES 20-74
    Organism: Escherichia coli DH5[alpha]
    Gene Names: rpsR ETEC_4548
    UniProtKB: Protein Feature View | Search PDB | E3PE70  
    Molecule: 30S RIBOSOMAL PROTEIN S19
    Polymer: 19 Type: protein Length: 79
    Chains: S
    Fragment: RESIDUES 3-81
    Organism: Escherichia coli DH5[alpha]
    Gene Names: rpsS ECSE_3591
    UniProtKB: Protein Feature View | Search PDB | B6I230  
    Molecule: 30S RIBOSOMAL PROTEIN S20
    Polymer: 20 Type: protein Length: 85
    Chains: T
    Fragment: RESIDUES 3-87
    Organism: Escherichia coli DH5[alpha]
    Gene Names: rpsT EC55989_0022
    UniProtKB: Protein Feature View | Search PDB | B7L4E5  
    Molecule: 30S RIBOSOMAL PROTEIN S21
    Polymer: 21 Type: protein Length: 51
    Chains: U
    Fragment: RESIDUES 4-54
    Organism: Escherichia coli DH5[alpha]
    Gene Names: rpsU EcSMS35_3358
    UniProtKB: Protein Feature View | Search PDB | B1LF57  
    Molecule: PUTATIVE RIBOSOME BIOGENESIS GTPASE RSGA
    Polymer: 22 Type: protein Length: 350
    Chains: W
    EC#: 3.6.1   
    Organism: Escherichia coli DH5[alpha]
    Gene Names: rsgA ETEC_4510
    UniProtKB: Protein Feature View | Search PDB | E3PE32  
     

  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Escherichia coli   Taxonomy    
    Polymer: 2
    Scientific Name: Escherichia coli   Taxonomy    
    Polymer: 3
    Scientific Name: Escherichia coli   Taxonomy    
    Polymer: 4
    Scientific Name: Escherichia coli   Taxonomy    
    Polymer: 5
    Scientific Name: Escherichia coli   Taxonomy    
    Polymer: 6
    Scientific Name: Escherichia coli   Taxonomy    
    Polymer: 7
    Scientific Name: Escherichia coli   Taxonomy    
    Polymer: 8
    Scientific Name: Escherichia coli   Taxonomy    
    Polymer: 9
    Scientific Name: Escherichia coli   Taxonomy    
    Polymer: 10
    Scientific Name: Escherichia coli   Taxonomy    
    Polymer: 11
    Scientific Name: Escherichia coli   Taxonomy    
    Polymer: 12
    Scientific Name: Escherichia coli   Taxonomy    
    Polymer: 13
    Scientific Name: Escherichia coli   Taxonomy    
    Polymer: 14
    Scientific Name: Escherichia coli   Taxonomy    
    Polymer: 15
    Scientific Name: Escherichia coli   Taxonomy    
    Polymer: 16
    Scientific Name: Escherichia coli   Taxonomy    
    Polymer: 17
    Scientific Name: Escherichia coli   Taxonomy    
    Polymer: 18
    Scientific Name: Escherichia coli   Taxonomy    
    Polymer: 19
    Scientific Name: Escherichia coli   Taxonomy    
    Polymer: 20
    Scientific Name: Escherichia coli   Taxonomy    
    Polymer: 21
    Scientific Name: Escherichia coli   Taxonomy    
    Polymer: 22
    Scientific Name: Escherichia coli   Taxonomy   Expression System: Escherichia coli  
     
  •   Related PDB Entries Hide
    Identifier Details
    2VHP  STRUCTURE OF PDF BINDING HELIX IN COMPLEX WITH THE RIBOSOME 
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors
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