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TRICYCLIC SERIES OF HSP90 INHIBITORS
2YJX
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Chaperone
    Structure Weight: 23664.03
    Molecule: HEAT SHOCK PROTEIN HSP 90-ALPHA
    Polymer: 1 Type: protein Length: 209
    Chains: A
    Fragment: N-DOMAIN, RESIDUES 18-233
    Organism: Homo sapiens
    Gene Names: Gene View for HSP90AA1 HSP90A HSPC1 HSPCA
    UniProtKB: Protein Feature View | Search PDB | P07900  
     
  •   Structure Validation Hide

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  •   Source Hide
    Polymer: 1
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli  
     
  •   Related PDB Entries Hide
    Identifier Details
    1BYQ  HSP90 N-TERMINAL DOMAIN BOUND TO ADP-MG 
    1OSF  HUMAN HSP90 IN COMPLEX WITH 17-DESMETHOXY-17-N,N- DIMETHYLAMINOETHYLAMINO-GELDANAMYCIN 
    1UY6  HUMAN HSP90-ALPHA WITH 9-BUTYL-8-(3,4,5-TRIMETHOXY -BENZYL)-9H-PURIN-6-YLAMINE 
    1UY7  HUMAN HSP90-ALPHA WITH 9-BUTYL-8-(4-METHOXY-BENZYL )-9H-PURIN-6-YLAMINE 
    1UY8  HUMAN HSP90-ALPHA WITH 9-BUTYL-8-(3-TRIMETHOXY- BENZYL)-9H-PURIN-6YLAMINE 
    1UY9  HUMAN HSP90-ALPHA WITH 8-BENZO[1,3]DIOXOL-,5- YLMETHYL-9-BUTYL-9H-PURIN-6-YLAMINE 
    1UYC  HUMAN HSP90-ALPHA WITH 9-BUTYL-8-(2,5-DIMETHOXY- BENZYL)-9H-PURIN-6-YLAMINE 
    1UYD  HUMAN HSP90-ALPHA WITH 9-BUTYL-8-(2-CHLORO-3,4,5 -TRIMETHOXY-BENZYL)-9H-PURIN-6-YLAMINE 
    1UYE  HUMAN HSP90-ALPHA WITH 8-(2-CHLORO-3,4,5- TRIMETHOXY-BENZYL)-9-PENT-4-YLNYL-9H-PURIN-6-YLAMINE 
    1UYF  HUMAN HSP90-ALPHA WITH 8-(2-CHLORO-3,4,5- TRIMETHOXY-BENZYL)-2-FLUORO-9-PENT-4-YLNYL-9H-PURIN -6-YLAMINE 
    1UYG  HUMAN HSP90-ALPHA WITH 8-(2,5-DIMETHOXY-BENZYL)-2- FLUORO-9H-PURIN-6-YLAMINE 
    1UYH  HUMAN HSP90-ALPHA WITH 9-BUTYL-8-(2,5-DIMETHOXY- BENZYL)-2-FLUORO-9H-PURIN-6-YLAMINE 
    1UYI  HUMAN HSP90-ALPHA WITH 8-(2,5-DIMETHOXY-BENZYL)-2- FLUORO-9-PENT-9H-PURIN-6-YLAMINE 
    1UYK  HUMAN HSP90-ALPHA WITH 8-BENZO[1,3]DIOXOL-,5- YLMETHYL-9-BUTYL-2-FLUORO-9H-PURIN-6-YLAMINE 
    1UYL  STRUCTURE-ACTIVITY RELATIONSHIPS IN PURINE-BASED INHIBITOR BINDING TO HSP90 ISOFORMS 
    1YC1  CRYSTAL STRUCTURES OF HUMAN HSP90ALPHA COMPLEXED WITHDIHYDROXYPHENYLPYRAZOLES 
    1YC3  CRYSTAL STRUCTURE OF HUMAN HSP90ALPHA COMPLEXED WITHDIHYDROXYPHENYLPYRAZOLES 
    1YC4  CRYSTAL STRUCTURE OF HUMAN HSP90ALPHA COMPLEXED WITHDIHYDROXYPHENYLPYRAZOLES 
    1YER  HUMAN HSP90 GELDANAMYCIN-BINDING DOMAIN, "CLOSED" CONFORMATION 
    1YES  HUMAN HSP90 GELDANAMYCIN-BINDING DOMAIN, "OPEN" CONFORMATION 
    1YET  GELDANAMYCIN BOUND TO THE HSP90 GELDANAMYCIN-BINDING DOMAIN 
    2BSM  NOVEL, POTENT SMALL MOLECULE INHIBITORS OF THE MOLECULAR CHAPERONE HSP90 DISCOVERED THROUGH STRUCTURE-BASED DESIGN 
    2BT0  NOVEL, POTENT SMALL MOLECULE INHIBITORS OF THE MOLECULAR CHAPERONE HSP90 DISCOVERED THROUGH STRUCTURE-BASED DESIGN 
    2BUG  SOLUTION STRUCTURE OF THE TPR DOMAIN FROM PROTEIN PHOSPHATASE 5 IN COMPLEX WITH HSP90 DERIVED PEPTIDE 
    2BYH  3-(5-CHLORO-2,4-DIHYDROXYPHENYL)-PYRAZOLE-4- CARBOXAMIDES AS INHIBITORS OF THE HSP90 MOLECULAR CHAPERONE 
    2BYI  3-(5-CHLORO-2,4-DIHYDROXYPHENYL)-PYRAZOLE-4- CARBOXAMIDES AS INHIBITORS OF THE HSP90 MOLECULAR CHAPERONE 
    2BZ5  STRUCTURE-BASED DISCOVERY OF A NEW CLASS OF HSP90 INHIBITORS 
    2C2L  CRYSTAL STRUCTURE OF THE CHIP U-BOX E3 UBIQUITIN LIGASE 
    2CCS  HUMAN HSP90 WITH 4-CHLORO-6-(4-PIPERAZIN-1-YL-1H- PYRAZOL-3-YL)-BENZENE-1,2-DIOL 
    2CCT  HUMAN HSP90 WITH 5-(5-CHLORO-2,4-DIHYDROXY-PHENYL)- 4-PIPERAZIN-1-YL-2H-PYRAZOLE-3-CARBOXYLIC ACID ETHYLAMIDE 
    2CCU  HUMAN HSP90 WITH 4-CHLORO-6-(4-(4-(4- METHANESULPHONYL-BENZYL)-PIERAZIN-1-YL)-1H-PYRAZOL-3- YL)-BENZENE-1,3-DIOL 
    2CDD  HUMAN HSP90 WITH 4-(4-(2,3-DIHYDRO-BENZOL(1,4) DIOXIN-6-YL)-5-METHYL-1H-PYRAZOL-3-YL)-6-ETHYL- BENZENE-1,3-DIOL 
    2FWY  STRUCTURE OF HUMAN HSP90-ALPHA BOUND TO THE POTENT WATERSOLUBLE INHIBITOR PU-H64 
    2FWZ  STRUCTURE OF HUMAN HSP90-ALPHA BOUND TO THE POTENT WATERSOLUBLE INHIBITOR PU-H71 
    2JJC  HSP90 ALPHA ATPASE DOMAIN WITH BOUND SMALL MOLECULE FRAGMENT 
    2UWD  INHIBITION OF THE HSP90 MOLECULAR CHAPERONE IN VITRO AND IN VIVO BY NOVEL, SYNTHETIC, POTENT RESORCINYLIC PYRAZOLE, ISOXAZOLE AMIDE ANALOGS 
    2VCI  4,5 DIARYL ISOXAZOLE HSP90 CHAPERONE INHIBITORS: POTENTIAL THERAPEUTIC AGENTS FOR THE TREATMENT OF CANCER 
    2VCJ  4,5 DIARYL ISOXAZOLE HSP90 CHAPERONE INHIBITORS: POTENTIAL THERAPEUTIC AGENTS FOR THE TREATMENT OF CANCER 
    2WI1  ORALLY ACTIVE 2-AMINO THIENOPYRIMIDINE INHIBITORS OF THE HSP90 CHAPERONE 
    2WI2  ORALLY ACTIVE 2-AMINO THIENOPYRIMIDINE INHIBITORS OF THE HSP90 CHAPERONE 
    2WI3  ORALLY ACTIVE 2-AMINO THIENOPYRIMIDINE INHIBITORS OF THE HSP90 CHAPERONE 
    2WI4  ORALLY ACTIVE 2-AMINO THIENOPYRIMIDINE INHIBITORS OF THE HSP90 CHAPERONE 
    2WI5  ORALLY ACTIVE 2-AMINO THIENOPYRIMIDINE INHIBITORS OF THE HSP90 CHAPERONE 
    2WI6  ORALLY ACTIVE 2-AMINO THIENOPYRIMIDINE INHIBITORS OF THE HSP90 CHAPERONE 
    2WI7  ORALLY ACTIVE 2-AMINO THIENOPYRIMIDINE INHIBITORS OF THE HSP90 CHAPERONE 
    2XAB  STRUCTURE OF HSP90 WITH AN INHIBITOR BOUND 
    2XDK  STRUCTURE OF HSP90 WITH SMALL MOLECULE INHIBITOR BOUND 
    2XDL  STRUCTURE OF HSP90 WITH SMALL MOLECULE INHIBITOR BOUND 
    2XDS  STRUCTRE OF HSP90 WITH SMALL MOLECULE INHIBITOR BOUND 
    2XDU  STRUCTRE OF HSP90 WITH SMALL MOLECULE INHIBITOR BOUND 
    2XDX  STRUCTRE OF HSP90 WITH SMALL MOLECULE INHIBITOR BOUND 
    2XHR  STRUCTURE OF HSP90 WITH SMALL MOLECULE INHIBITOR BOUND 
    2XHT  STRUCTRE OF HSP90 WITH SMALL MOLECULE INHIBITOR BOUND 
    2XHX  STRUCTURE OF HSP90 WITH SMALL MOLECULE INHIBITOR BOUND 
    2XJG  STRUCTRE OF HSP90 WITH SMALL MOLECULE INHIBITOR BOUND 
    2XJJ  STRUCTRE OF HSP90 WITH SMALL MOLECULE INHIBITOR BOUND 
    2XJX  STRUCTRE OF HSP90 WITH SMALL MOLECULE INHIBITOR BOUND 
    2XK2  STRUCTRE OF HSP90 WITH SMALL MOLECULE INHIBITOR BOUND 
    2YE2  HSP90 INHIBITORS AND DRUGS FROM FRAGMENT AND VIRTUAL SCREENING 
    2YE3  HSP90 INHIBITORS AND DRUGS FROM FRAGMENT AND VIRTUAL SCREENING 
    2YE4  HSP90 INHIBITORS AND DRUGS FROM FRAGMENT AND VIRTUAL SCREENING 
    2YE5  HSP90 INHIBITORS AND DRUGS FROM FRAGMENT AND VIRTUAL SCREENING 
    2YE6  HSP90 INHIBITORS AND DRUGS FROM FRAGMENT AND VIRTUAL SCREENING 
    2YE7  HSP90 INHIBITORS AND DRUGS FROM FRAGMENT AND VIRTUAL SCREENING 
    2YE8  HSP90 INHIBITORS AND DRUGS FROM FRAGMENT AND VIRTUAL SCREENING 
    2YE9  HSP90 INHIBITORS AND DRUGS FROM FRAGMENT AND VIRTUAL SCREENING 
    2YEA  HSP90 INHIBITORS AND DRUGS FROM FRAGMENT AND VIRTUAL SCREENING 
    2YEB  HSP90 INHIBITORS AND DRUGS FROM FRAGMENT AND VIRTUAL SCREENING 
    2YEC  HSP90 INHIBITORS AND DRUGS FROM FRAGMENT AND VIRTUAL SCREENING 
    2YED  HSP90 INHIBITORS AND DRUGS FROM FRAGMENT AND VIRTUAL SCREENING 
    2YEE  HSP90 INHIBITORS AND DRUGS FROM FRAGMENT AND VIRTUAL SCREENING 
    2YEF  HSP90 INHIBITORS AND DRUGS FROM FRAGMENT AND VIRTUAL SCREENING 
    2YEG  HSP90 INHIBITORS AND DRUGS FROM FRAGMENT AND VIRTUAL SCREENING 
    2YEH  HSP90 INHIBITORS AND DRUGS FROM FRAGMENT AND VIRTUAL SCREENING 
    2YEI  HSP90 INHIBITORS AND DRUGS FROM FRAGMENT AND VIRTUAL SCREENING 
    2YEJ  HSP90 INHIBITORS AND DRUGS FROM FRAGMENT AND VIRTUAL SCREENING 
    2YI0  STRUCTURAL CHARACTERIZATION OF 5-ARYL-4-(5-SUBSTITUTED- 2-4-DIHYDROXYPHENYL)-1,2,3-THIADIAZOLE HSP90 INHIBITORS. 
    2YI5  STRUCTURAL CHARACTERIZATION OF 5-ARYL-4-(5-SUBSTITUTED- 2-4-DIHYDROXYPHENYL)-1,2,3-THIADIAZOLE HSP90 INHIBITORS. 
    2YI6  STRUCTURAL CHARACTERIZATION OF 5-ARYL-4-(5-SUBSTITUTED- 2-4-DIHYDROXYPHENYL)-1,2,3-THIADIAZOLE HSP90 INHIBITORS. 
    2YI7  STRUCTURAL CHARACTERIZATION OF 5-ARYL-4-(5-SUBSTITUTED- 2-4-DIHYDROXYPHENYL)-1,2,3-THIADIAZOLE HSP90 INHIBITORS. 
    2YJW  TRICYCLIC SERIES OF HSP90 INHIBITORS 
    2YK2  TRICYCLIC SERIES OF HSP90 INHIBITORS 
    2YK9  TRICYCLIC SERIES OF HSP90 INHIBITORS 
    2YKB  TRICYCLIC SERIES OF HSP90 INHIBITORS 
    2YKC  TRICYCLIC SERIES OF HSP90 INHIBITORS 
    2YKE  TRICYCLIC SERIES OF HSP90 INHIBITORS 
    2YKI  TRICYCLIC SERIES OF HSP90 INHIBITORS 
    2YKJ  TRICYCLIC SERIES OF HSP90 INHIBITORS 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    YJX
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    YJX C18 H14 N4 O
    1-(3H-imidazo[4,5-c]pyridin-2-yl)-3,4-dihydropyrido[2,1- a]isoindol-6(2H)-one
    YJX:2YJX
     
  •   External Ligand Annotations Hide
    Identifier   Binding Affinity (Sequence Identity %)
    YJX
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    YJX
    N/Ain BindingDB
    N/Ain BindingMoad
    IC50: 7600 nM - data from PDBbind  
     
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Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Dupuy, A.,  Vallee, F.

    Deposition:   2011-05-24
    Release:   2011-10-19
    Last Modified (REVDAT):   2011-11-02
     
  •   Revision History    Hide
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    2011-11-02
    Citation
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   1.83
    R-Value: 0.176 (obs.)
    R-Free: 0.199
    Space Group: I 2 2 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 66.40 α = 90.00 
    b = 90.76 β = 90.00 
    c = 98.73 γ = 90.00