2YHE

Structure determination of the stereoselective inverting sec- alkylsulfatase Pisa1 from Pseudomonas sp.

Structural Biology Knowledgebase: 2YHE SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.230
  • R-Value Work: 0.183

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2YHE

Classification: HYDROLASE

Total Structure Weight: 445238.94

Macromolecule Entities
Molecule Chains Length Organism Details
SEC-ALKYL SULFATASE A, B, C..., D, E, FA, B, C, D, E, F 668 Pseudomonas sp. dsm 6611 Mutation: H107R
Gene Name(s): pisa1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A, B, C, D, E, F SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ZN
Query on ZN

A, B, C, D, E, F ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.230
  • R-Value Work: 0.183
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 74.73 α = 90.00
b = 200.59 β = 90.00
c = 245.33 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2011-04-29
  • Released Date: 2012-05-16
  • Deposition author(s): Kepplinger, B., Faber, K., Macheroux, P., Schober, M., Knaus, T., Wagner, U.G.

Revision History

  • 2012-12-05
    Type: Citation | Details: JRNL
  • 2012-12-05
    Type: Other | Details: REMARK 900
  • 2012-12-05
    Type: Source and taxonomy | Details: SOURCE
  • 2012-12-05
    Type: Sequence database correspondence | Details: SEQADV, DBREF