FACTOR INHIBITING HIF-1 ALPHA IN COMPLEX WITH S-2-HYDROXYGLUTARATE DOI:10.2210/pdb2yde/pdb

2YDE   Display Files  close FASTA Sequence PDB File PDB File (Header) mmCIF File mmCIF File (Header) PDBML/XML File PDBML/XML File (Header)   Download Files  close FASTA Sequence PDB File (Text) PDB File (gz) mmCIF File mmCIF File (gz) PDBML/XML File PDBML/XML File (gz) Structure Factor (Text) Structure Factor (gz) Biological Assembly (gz) (A+S)   Share this Page  close Facebook Twitter LinkedIn Email Link this Page

Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: Oxidoreductase Structure Weight: 41531.50 Molecule: HYPOXIA-INDUCIBLE FACTOR 1-ALPHA INHIBITOR Polymer: 1 Type: protein Length: 352 Chains: A EC#: 1.14.11.30    1.14.11.n4    Organism Homo sapiens Gene Names HIF1AN FIH1 UniProtKB:   Protein Feature View | Search PDB | Q9NWT6         Source Hide Polymer: 1 Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli       Related PDB Entries Hide Identifier Details 1H2K  FACTOR INHIBITING HIF-1 ALPHA IN COMPLEX WITH HIF-1 ALPHA FRAGMENT PEPTIDE  1H2L  FACTOR INHIBITING HIF-1 ALPHA IN COMPLEX WITH HIF-1 ALPHA FRAGMENT PEPTIDE  1H2M  FACTOR INHIBITING HIF-1 ALPHA IN COMPLEX WITH HIF-1 ALPHA FRAGMENT PEPTIDE  1H2N  FACTOR INHIBITING HIF-1 ALPHA IN COMPLEX WITH HIF-1 ALPHA FRAGMENT PEPTIDE  1IZ3  DIMERIC STRUCTURE OF FIH (FACTOR INHIBITING HIF)  1MZE  HUMAN FACTOR INHIBITING HIF (FIH1)  1MZF  HUMAN FACTOR INHIBITING HIF (FIH1) IN COMPLEX WITH 2- OXOGLUTARATE  1YCI  FACTOR INHIBITING HIF-1 ALPHA IN COMPLEX WITH N-( CARBOXYCARBONYL)-D-PHENYLALANINE  2CGN  FACTOR INHIBITING HIF-1 ALPHA WITH SUCCINATE  2CGO  FACTOR INHIBITING HIF-1 ALPHA WITH FUMARATE  2W0X  FACTOR INHIBITING HIF-1 ALPHA WITH PYRIDINE 2,4 DICARBOXYLIC ACID  2WA3  FACTOR INHIBITING HIF-1 ALPHA WITH 2-(3-HYDROXYPHENYL )-2-OXOACETIC ACID  2WA4  FACTOR INHIBITING HIF-1 ALPHA WITH N,3- DIHYDROXYBENZAMIDE  2XUM  FACTOR INHIBITING HIF (FIH) Q239H MUTANT IN COMPLEX WITH ZN(II), NOG AND ASP-SUBSTRATE PEPTIDE (20-MER)  2Y0I  FACTOR INHIBITING HIF-1 ALPHA IN COMPLEX WITH TANKYRASE-2 (TNKS2) FRAGMENT PEPTIDE (21-MER)  2YC0  FACTOR INHIBITING HIF-1 ALPHA IN COMPLEX WITH R-2- HYDROXYGLUTARATE      Ligand Chemical Component Hide Identifier Formula Name Interactions FE Search  Download  Fe FE (III) ION   Ligand Explorer GOL Search  Download  C3 H8 O3 GLYCEROL   Ligand Explorer S2G Search  Download  C5 H8 O5 (2S)-2-HYDROXYPENTANEDIOIC ACID   Ligand Explorer SO4 Search  Download  O4 S SULFATE ION   Ligand Explorer     External Ligand Annotations Hide Identifier   Binding Affinity (Sequence Identity %) S2G Search  Download  N/A in BindingDB IC50: 189000 nM - data from BindingMOAD   IC50: 189000 nM - data from PDBbind       External Domain Annotations Hide Pfam Classification: 2 Domains - data from Pfam   GO Terms: 33 Terms - data from GO      Structural Biology Knowledgebase Data Hide     Data in orange boxes are gathered from external resources (when available). Reset Layout

Biological Assembly            View in 3D More Images... Biological assembly 1 assigned by authors and generated by PISA (software) Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol QuickPDB FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Chowdhury, R.,  Clifton, I.J.,  Schofield, C.J. Deposition:   2011-03-18 Release:   2011-03-30 Last Modified (REVDAT):   2011-05-11     Revision History    Hide Mouse over text for details 2011-07-13 Version format compliance     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data:   Structure Factors EDS   Resolution[Å]:   2.28 R-Value: 0.235 (obs.) R-Free: 0.243 Space Group: P 41 21 2 Unit Cell:   Length [Å] Angles [°] a = 86.73 α = 90.00  b = 86.73 β = 90.00  c = 146.05 γ = 90.00