2XWT

CRYSTAL STRUCTURE OF THE TSH RECEPTOR IN COMPLEX WITH A BLOCKING TYPE TSHR AUTOANTIBODY


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.227
  • R-Value Work: 0.177

Literature

Macromolecules
Sequence Display for 2XWT

Classification: SIGNALING PROTEIN / IMMUNE SYSTEM

Total Structure Weight: 74867.02

Macromolecule Entities
Molecule Chains Length Organism Details
THYROID BLOCKING HUMAN AUTOANTIBODY K1-70 HEAVY CHAIN A 221 Homo sapiens Fragment: FAB FRAGMENT HEAVY CHAIN, RESIDUES 1-229
THYROID BLOCKING HUMAN AUTOANTIBODY K1-70 LIGHT CHAIN B 214 Homo sapiens Fragment: FAB FRAGMENT LIGHT CHAIN, RESIDUES 1-213
THYROTROPIN RECEPTOR C 239 Homo sapiens Fragment: LEUCINE RICH REPEAT DOMAIN, RESIDUES 22-260
Gene Name(s): TSHR Gene View LGR3
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NAG
Query on NAG

C N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MAN
Query on MAN

C ALPHA-D-MANNOSE
C6 H12 O6
WQZGKKKJIJFFOK-PQMKYFCFSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
BMA
Query on BMA

C BETA-D-MANNOSE
C6 H12 O6
WQZGKKKJIJFFOK-RWOPYEJCSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.227
  • R-Value Work: 0.177
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 83.02 α = 90.00
b = 89.30 β = 90.00
c = 101.27 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2010-11-05
  • Released Date: 2011-03-09
  • Deposition author(s): Sanders, J., Sanders, P., Young, S., Kabelis, K., Baker, S., Sullivan, A., Evans, M., Clark, J., Wilmot, J., Hu, X., Roberts, E., Powell, M., Nunez Miguel, R., Furmaniak, J., Rees Smith, B.

Revision History

  • Version 1_0: 2011-03-09

    Type: Initial release

  • Version 1_1: 2011-05-08

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance

  • Version 1_3: 2017-06-28

    Type: Data collection