Structure of HSP90 with small molecule inhibitor bound
2XDU
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Chaperone
    Structure Weight: 26801.16
    Molecule: HEAT SHOCK PROTEIN HSP 90-ALPHA
    Polymer: 1 Type: protein Length: 236
    Chains: A
    Fragment: RESIDUES 14-224
    Organism: Homo sapiens
    Gene Names: Gene View for HSP90AA1 HSP90A HSPC1 HSPCA
    UniProtKB: Protein Feature View | Search PDB | P07900  
     
  •   Structure Validation Hide

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  •   Source Hide
    Polymer: 1
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli  
     
  •   Related PDB Entries Hide
    Identifier Details
    1BYQ   HSP90 N-TERMINAL DOMAIN BOUND TO ADP-MG 
    1OSF   HUMAN HSP90 IN COMPLEX WITH 17-DESMETHOXY- 17-N,N-DIMETHYLAMINOETHYLAMINO-GELDANAMYCIN 
    1UY6   HUMAN HSP90-ALPHA WITH 9-BUTYL-8-(3,4, 5-TRIMETHOXY-BENZYL)-9H-PURIN-6-YLAMINE 
    1UY7   HUMAN HSP90-ALPHA WITH 9-BUTYL-8-(4- METHOXY-BENZYL)-9H-PURIN-6-YLAMINE 
    1UY8   HUMAN HSP90-ALPHA WITH 9-BUTYL-8-(3- TRIMETHOXY-BENZYL)-9H-PURIN-6YLAMINE 
    1UY9   HUMAN HSP90-ALPHA WITH 8-BENZO[1,3] DIOXOL-,5-YLMETHYL-9-BUTYL-9H-PURIN-6- YLAMINE 
    1UYC   HUMAN HSP90-ALPHA WITH 9-BUTYL-8-(2,5- DIMETHOXY-BENZYL)-9H-PURIN-6-YLAMINE 
    1UYD   HUMAN HSP90-ALPHA WITH 9-BUTYL-8-(2- CHLORO-3,4,5-TRIMETHOXY-BENZYL)-9H-PURIN- 6-YLAMINE 
    1UYE   HUMAN HSP90-ALPHA WITH 8-(2-CHLORO-3,4, 5-TRIMETHOXY-BENZYL)-9-PENT-4-YLNYL-9H- PURIN-6-YLAMINE 
    1UYF   HUMAN HSP90-ALPHA WITH 8-(2-CHLORO-3,4, 5-TRIMETHOXY-BENZYL)-2-FLUORO-9-PENT-4- YLNYL-9H-PURIN-6-YLAMINE 
    1UYG   HUMAN HSP90-ALPHA WITH 8-(2,5-DIMETHOXY- BENZYL)-2-FLUORO-9H-PURIN-6-YLAMINE 
    1UYH   HUMAN HSP90-ALPHA WITH 9-BUTYL-8-(2,5- DIMETHOXY-BENZYL)-2-FLUORO-9H-PURIN-6- YLAMINE 
    1UYI   HUMAN HSP90-ALPHA WITH 8-(2,5-DIMETHOXY- BENZYL)-2-FLUORO-9-PENT-9H-PURIN-6- YLAMINE 
    1UYK   HUMAN HSP90-ALPHA WITH 8-BENZO[1,3] DIOXOL-,5-YLMETHYL-9-BUTYL-2-FLUORO-9H- PURIN-6-YLAMINE 
    1UYL   STRUCTURE-ACTIVITY RELATIONSHIPS IN PURINE- BASED INHIBITOR BINDING TO HSP90 ISOFORMS 
    1YC1   CRYSTAL STRUCTURES OF HUMAN HSP90ALPHA COMPLEXED WITHDIHYDROXYPHENYLPYRAZOLES 
    1YC3   CRYSTAL STRUCTURE OF HUMAN HSP90ALPHA COMPLEXED WITHDIHYDROXYPHENYLPYRAZOLES 
    1YC4   CRYSTAL STRUCTURE OF HUMAN HSP90ALPHA COMPLEXED WITHDIHYDROXYPHENYLPYRAZOLES 
    1YER   HUMAN HSP90 GELDANAMYCIN-BINDING DOMAIN, " CLOSED" CONFORMATION 
    1YES   HUMAN HSP90 GELDANAMYCIN-BINDING DOMAIN, "OPEN " CONFORMATION 
    1YET   GELDANAMYCIN BOUND TO THE HSP90 GELDANAMYCIN- BINDING DOMAIN 
    2BSM   NOVEL, POTENT SMALL MOLECULE INHIBITORS OF THE MOLECULAR CHAPERONE HSP90 DISCOVERED THROUGH STRUCTURE-BASED DESIGN 
    2BT0   NOVEL, POTENT SMALL MOLECULE INHIBITORS OF THE MOLECULAR CHAPERONE HSP90 DISCOVERED THROUGH STRUCTURE-BASED DESIGN 
    2BUG   SOLUTION STRUCTURE OF THE TPR DOMAIN FROM PROTEIN PHOSPHATASE 5 IN COMPLEX WITH HSP90 DERIVED PEPTIDE 
    2BYH   3-(5-CHLORO-2,4-DIHYDROXYPHENYL)-PYRAZOLE- 4-CARBOXAMIDES AS INHIBITORS OF THE HSP90 MOLECULAR CHAPERONE 
    2BYI   3-(5-CHLORO-2,4-DIHYDROXYPHENYL)-PYRAZOLE- 4-CARBOXAMIDES AS INHIBITORS OF THE HSP90 MOLECULAR CHAPERONE 
    2BZ5   STRUCTURE-BASED DISCOVERY OF A NEW CLASS OF HSP90 INHIBITORS 
    2C2L   CRYSTAL STRUCTURE OF THE CHIP U-BOX E3 UBIQUITIN LIGASE 
    2CCS   HUMAN HSP90 WITH 4-CHLORO-6-(4-PIPERAZIN- 1-YL-1H-PYRAZOL-3-YL)-BENZENE-1,2-DIOL 
    2CCT   HUMAN HSP90 WITH 5-(5-CHLORO-2,4- DIHYDROXY-PHENYL)-4-PIPERAZIN-1-YL-2H- PYRAZOLE-3-CARBOXYLIC ACID ETHYLAMIDE 
    2CCU   HUMAN HSP90 WITH 4-CHLORO-6-(4-(4-(4- METHANESULPHONYL-BENZYL)-PIERAZIN-1-YL)-1H- PYRAZOL-3-YL)-BENZENE-1,3-DIOL 
    2CDD   HUMAN HSP90 WITH 4-(4-(2,3-DIHYDRO- BENZOL(1,4)DIOXIN-6-YL)-5-METHYL-1H- PYRAZOL-3-YL)-6-ETHYL-BENZENE-1,3-DIOL 
    2FWY   STRUCTURE OF HUMAN HSP90-ALPHA BOUND TO THE POTENT WATERSOLUBLE INHIBITOR PU-H64 
    2FWZ   STRUCTURE OF HUMAN HSP90-ALPHA BOUND TO THE POTENT WATERSOLUBLE INHIBITOR PU-H71 
    2JJC   HSP90 ALPHA ATPASE DOMAIN WITH BOUND SMALL MOLECULE FRAGMENT 
    2UWD   INHIBITION OF THE HSP90 MOLECULAR CHAPERONE IN VITRO AND IN VIVO BY NOVEL, SYNTHETIC , POTENT RESORCINYLIC PYRAZOLE, ISOXAZOLE AMIDE ANALOGS 
    2VCI   4,5 DIARYL ISOXAZOLE HSP90 CHAPERONE INHIBITORS: POTENTIAL THERAPEUTIC AGENTS FOR THE TREATMENT OF CANCER 
    2VCJ   4,5 DIARYL ISOXAZOLE HSP90 CHAPERONE INHIBITORS: POTENTIAL THERAPEUTIC AGENTS FOR THE TREATMENT OF CANCER 
    2WI1   ORALLY ACTIVE 2-AMINO THIENOPYRIMIDINE INHIBITORS OF THE HSP90 CHAPERONE 
    2WI2   ORALLY ACTIVE 2-AMINO THIENOPYRIMIDINE INHIBITORS OF THE HSP90 CHAPERONE 
    2WI3   ORALLY ACTIVE 2-AMINO THIENOPYRIMIDINE INHIBITORS OF THE HSP90 CHAPERONE 
    2WI4   ORALLY ACTIVE 2-AMINO THIENOPYRIMIDINE INHIBITORS OF THE HSP90 CHAPERONE 
    2WI5   ORALLY ACTIVE 2-AMINO THIENOPYRIMIDINE INHIBITORS OF THE HSP90 CHAPERONE 
    2WI6   ORALLY ACTIVE 2-AMINO THIENOPYRIMIDINE INHIBITORS OF THE HSP90 CHAPERONE 
    2WI7   ORALLY ACTIVE 2-AMINO THIENOPYRIMIDINE INHIBITORS OF THE HSP90 CHAPERONE 
    2XAB   STRUCTURE OF HSP90 WITH AN INHIBITOR BOUND 
    2XDK   STRUCTURE OF HSP90 WITH SMALL MOLECULE INHIBITOR BOUND 
    2XDL   STRUCTURE OF HSP90 WITH SMALL MOLECULE INHIBITOR BOUND 
    2XDX   STRUCTURE OF HSP90 WITH SMALL MOLECULE INHIBITOR BOUND 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    DMS
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    DMS C2 H6 O S
    DIMETHYL SULFOXIDE
    LGA
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    LGA C4 H5 N3
    PYRIMIDIN-2-AMINE
    LGA:2XDU
    MG
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    MG Mg
    MAGNESIUM ION
    MT0
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    MT0 C9 H7 Cl N2
    1-CHLORO-4-METHYLPHTHALAZINE
    MT0:2XDU
     
  •   External Ligand Annotations Hide
    Identifier   Binding Affinity (Sequence Identity %)
    LGA
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    LGA
    Kd: 19000000 nM (99) - data from BindingDB  
    N/Ain BindingMoad
    N/Ain PDBbind
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly       
Biological assembly 1 generated by PISA (software)
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