2W9D

Structure of Fab fragment of the ICSM 18 - anti-Prp therapeutic antibody at 1.57 A resolution.


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.57 Å
  • R-Value Free: 0.217
  • R-Value Work: 0.184

Literature

Macromolecules
Sequence Display for 2W9D

Classification: IMMUNE SYSTEM

Total Structure Weight: 46573.72

Macromolecule Entities
Molecule Chains Length Organism Details
ICSM 18-ANTI-PRP THERAPEUTIC FAB HEAVY CHAIN H 215 Mus musculus
ICSM 18-ANTI-PRP THERAPEUTIC FAB LIGHT CHAIN L 212 Mus musculus

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CA
Query on CA

H CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
PCA
Query on PCA
L L-PEPTIDE LINKING C5 H7 N O3 GLU

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.57 Å
  • R-Value Free: 0.217
  • R-Value Work: 0.184
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 36.78 α = 90.00
b = 84.71 β = 90.00
c = 127.85 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2009-01-23
  • Released Date: 2009-02-03
  • Deposition author(s): Antonyuk, S.V., Trevitt, C.R., Strange, R.W., Jackson, G.S., Sangar, D., Batchelor, M., Jones, S., Georgiou, T., Cooper, S., Fraser, C., Khalili-Shirazi, A., Clarke, A.R., Hasnain, S.S., Collinge, J.

Revision History

  • 2011-07-13
    Type: Advisory, Refinement description, Version format compliance