2VI4

Atomic resolution (1.10 A) structure of purified thaumatin I grown in sodium DL-tartrate at 6 C.

Structural Biology Knowledgebase: 2VI4 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.1 Å
  • R-Value Free: 0.140
  • R-Value Work: 0.125

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2VI4

Classification: PLANT PROTEIN

Total Structure Weight: 22653.57

Macromolecule Entities
Molecule Chains Length Organism Details
THAUMATIN-1 A 207 Thaumatococcus daniellii

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GOL
Query on GOL

A GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer
 
JSmol
TLA
Query on TLA

A L(+)-TARTARIC ACID
C4 H6 O6
FEWJPZIEWOKRBE-JCYAYHJZSA-N
Ligand Explorer
 
JSmol

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.1 Å
  • R-Value Free: 0.140
  • R-Value Work: 0.125
  • Space Group: P 41 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 57.92 α = 90.00
b = 57.92 β = 90.00
c = 149.95 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2007-11-26
  • Released Date: 2009-02-10
  • Deposition author(s): Jakoncic, J., Asherie, N., Ginsberg, C.

Revision History

  • 2014-12-31
    Type: Data collection | Details: REMARK 200
  • 2014-12-31
    Type: Biological assembly | Details: REMARK 300,REMARK 350
  • 2014-12-31
    Type: Version format compliance | Details: REMARK 4
  • 2014-12-31
    Type: Non-polymer description | Details: FORMUL,HETSYN
  • 2014-12-31
    Type: Other | Details: REMARK 525
  • 2014-12-31
    Type: Geometry validation | Details: REMARK 500