POP-OUT | CLOSE
X-RAY STRUCTURE OF A NF-KB P50-RELB-DNA COMPLEX
DOI:10.2210/pdb2v2t/pdb   NDB ID: 2V2T
2V2T
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Transcription
    Structure Weight: 75986.02
    Molecule: TRANSCRIPTION FACTOR RELB
    Polymer: 1 Type: protein Length: 288
    Chains: A
    Fragment: RESIDUES 91-378
    Organism Mus musculus
    Gene Name Relb
    UniProtKB:   Protein Feature View | Search PDB | Q04863  
    Molecule: NUCLEAR FACTOR NF-KAPPA-B P105 SUBUNIT
    Polymer: 2 Type: protein Length: 326
    Chains: B
    Fragment: NUCLEAR FACTOR NF-KAPPA-B P50 SUBUNIT, RESIDUES 38-363
    Organism Mus musculus
    Gene Name Nfkb1
    UniProtKB:   Protein Feature View | Search PDB | P25799  
    Molecule: 5'-D(*CP*GP*GP*GP*AP*AP*TP*TP*CP*CP*CP)-3'
    Polymer: 3 Type: dna Length: 11
    Chains: C, D
     
  •   Structure Validation Hide

    Download full validation report    

     
  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Mus musculus   Taxonomy   Common Name: Mouse Expression System: Escherichia coli  
    Polymer: 2
    Scientific Name: Mus musculus   Taxonomy   Common Name: Mouse Expression System: Escherichia coli  
    Polymer: 3
    Scientific Name: Synthetic construct   Taxonomy    
     
  •   Related PDB Entries Hide
    Identifier Details
    1BFS  STRUCTURE OF NF-KB P50 HOMODIMER BOUND TO A KB SITE 
    1IKN  IKAPPABALPHA/NF-KAPPAB COMPLEX 
    1LE5  CRYSTAL STRUCTURE OF A NF-KB HETERODIMER BOUND TO AN IFNB-KB 
    1LE9  CRYSTAL STRUCTURE OF A NF-KB HETERODIMER BOUND TO THEIG/HIV-KB SITI 
    1LEI  THE KB DNA SEQUENCE FROM THE HLV-LTR FUNCTIONS AS ANALLOSTERIC REGULATOR OF HIV TRANSCRIPTION 
    1NFK  STRUCTURE OF THE NUCLEAR FACTOR KAPPA-B ( NF-KB) P50 HOMODIMER 
    1OOA  CRYSTAL STRUCTURE OF NF-KB(P50)2 COMPLEXED TO A HIGH-AFFINITY RNA APTAMER 
    1U36  CRYSTAL STUCTURE OF WLAC MUTANT OF DIMERISATION DOMAIN OFNF-KB P50 TRANSCRIPTION FACTOR 
    1U3J  CRYSTAL STUCTURE OF MLAV MUTANT OF DIMERISATION DOMAIN OFNF-KB P50 TRANSCRIPTION FACTOR 
    1U3Y  CRYSTAL STUCTURE OF ILAC MUTANT OF DIMERISATION DOMAIN OFNF-KB P50 TRANSCRIPTION FACTOR 
    1U3Z  CRYSTAL STUCTURE OF MLAC MUTANT OF DIMERISATION DOMAIN OFNF-KB P50 TRANSCRIPTION FACTOR 
    1U41  CRYSTAL STUCTURE OF YLGV MUTANT OF DIMERISATION DOMAIN OFNF-KB P50 TRANSCRIPTION FACTOR 
    1U42  CRYSTAL STUCTURE OF MLAM MUTANT OF DIMERISATION DOMAIN OFNF-KB P50 TRANSCRIPTION FACTOR 
    1VKX  CRYSTAL STRUCTURE OF THE NFKB P50/P65 HETERODIMER COMPLEXED TO THE IMMUNOGLOBULIN KB DEOXYRIBONUCLEIC ACID 
    1ZK9  NF-KB RELB FORMS AN INTERTWINED HOMODIMER 
    1ZKA  NF-KB RELB FORMS AN INTERTWINED HOMODIMER, Y300S MUTANT 
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure: 2V2T
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PQS (software)
Downloadable viewers:
 
 
 
  •   MyPDB Personal Annotations Hide
     
  •   Deposition Summary Hide
    Authors:   Moorthy, A.K.,  Huang, D.B.,  Wang, V.Y.,  Vu, D.,  Ghosh, G.

    Deposition:   2007-06-07
    Release:   2007-07-03
    Last Modified (REVDAT):   2009-02-24
     
  •   Revision History    Hide
    Mouse over text for details
    2011-07-13
    Version format compliance
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
    N/A
    Resolution[Å]:   3.05
    R-Value: 0.238 (obs.)
    R-Free: 0.276
    Space Group: P 61 2 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 91.44 α = 90.00 
    b = 91.44 β = 90.00 
    c = 419.97 γ = 120.00