2RIV

Crystal structure of the reactive loop cleaved human Thyroxine Binding Globulin

Structural Biology Knowledgebase: 2RIV SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.5 Å
  • R-Value Free: 0.214
  • R-Value Work: 0.189

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2RIV

Classification: SIGNALING PROTEIN

Total Structure Weight: 43473.22

Macromolecule Entities
Molecule Chains Length Organism Details
Thyroxine-binding globulin A 343 Homo sapiens Fragment: N-terminal domain, UNP residues 33-375
Mutation: A346G, V347A, P348M, E349F, V350L, E351E, L352A, S353I, D354P, Q355R
Gene Name(s): SERPINA7 Gene View TBG
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Thyroxine-binding globulin B 40 Homo sapiens Fragment: reactive loop cleaved TBG, C-teemingly domain, UNP residues 376-415
Mutation: P356S
Gene Name(s): SERPINA7 Gene View TBG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GOL
Query on GOL

A GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.5 Å
  • R-Value Free: 0.214
  • R-Value Work: 0.189
  • Space Group: P 21 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 173.14 α = 90.00
b = 42.58 β = 90.00
c = 55.99 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2007-10-12
  • Released Date: 2008-10-14
  • Deposition author(s): Zhou, A., Wei, Z., Stanley, P.L.D., Read, R.J., Stein, P.E., Carrell, R.W.

Revision History

  • 2013-01-16
    Type: Citation | Details: Citation update
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Flag residual B-value | Details: Tagged residual B temperature factor