2RC9

Crystal structure of the NR3A ligand binding core complex with ACPC at 1.96 Angstrom resolution

Structural Biology Knowledgebase: 2RC9 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.96 Å
  • R-Value Free: 0.211
  • R-Value Work: 0.156

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2RC9

Classification: MEMBRANE PROTEIN

Total Structure Weight: 66075.30

Macromolecule Entities
Molecule Chains Length Organism Details
Glutamate [NMDA] receptor subunit 3A A, B 294 Rattus norvegicus Fragment: unp residues 511-660, 776-915
Gene Name(s): Grin3a
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
1AC
Query on 1AC

A, B 1-AMINOCYCLOPROPANECARBOXYLIC ACID
C4 H7 N O2
PAJPWUMXBYXFCZ-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
1AC N/A in BindingDB
N/A in BindingMoad
IC50: 40 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.96 Å
  • R-Value Free: 0.211
  • R-Value Work: 0.156
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 49.67 α = 90.00
b = 103.55 β = 95.04
c = 59.80 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2007-09-19
  • Released Date: 2008-08-05
  • Deposition author(s): Yao, Y., Mayer, M.L.

Revision History

  • 2011-07-13
    Type: Flag residual B-value | Details: Tagged residual B temperature factor
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4