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Structure of the octameric penicillin-binding protein homologue from Pyrococcus abyssi
2QMI
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Hydrolase
    Structure Weight: 408623.47
    Molecule: Pbp related beta-lactamase
    Polymer: 1 Type: protein Length: 447
    Chains: A, B, C, D, E, F, G, H
    EC#: 3.5.2.6   
    Organism: Pyrococcus abyssi
    Gene Names: pbp PYRAB01380 PAB0087
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  •   Structure Validation Hide

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  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Pyrococcus abyssi   Taxonomy   Expression System: Escherichia coli  
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    DO3
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    DO3 C17 H32 N4 O7
    10-((2R)-2-HYDROXYPROPYL)-1,4,7,10-TETRAAZACYCLODODECANE 1,4,7- TRIACETIC ACID
    LU
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    LU Lu
    LUTETIUM (III) ION
     
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  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Delfosse, V.,  Girard, E.,  Moulinier, L.,  Schultz, P.,  Mayer, C.

    Deposition:   2007-07-16
    Release:   2008-07-22
    Last Modified (REVDAT):   2009-06-16
     
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    2011-07-13
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  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   2.20
    R-Value: 0.196 (obs.)
    R-Free: 0.241
    Space Group: P 1
    Unit Cell:
      Length [Å] Angles [°]
    a = 100.94 α = 72.17 
    b = 105.63 β = 66.51 
    c = 112.92 γ = 81.39