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Crystal structures of an isolated ABC-ATPase in complex with TNP-ADP
2PMK
Primary Citation
 
 
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  •   Molecular Description Hide
    Classification: Transport Protein
    Structure Weight: 28345.98
    Molecule: Alpha-hemolysin translocation ATP-binding protein hlyB
    Polymer: 1 Type: protein Length: 243
    Chains: A
    Fragment: ABC transporter (Residues 467-707)
    Organism Escherichia coli
    Gene Name hlyB
    UniProtKB:   Protein Feature View | Search PDB | P08716  
     
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    Polymer: 1
    Scientific Name: Escherichia coli   Taxonomy   Expression System: Escherichia coli bl21(de3)  
     
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    Identifier Details
    1MT0   
    1XEF   
    2FF7   
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name Interactions
    128
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    128 C16 H17 N8 O19 P3
    SPIRO(2,4,6-TRINITROBENZENE[1,2A]-2O',3O'- METHYLENE-ADENINE-TRIPHOSPHATE
    128:2PMK
    ADP
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    ADP C10 H15 N5 O10 P2
    ADENOSINE-5'-DIPHOSPHATE
    ADP:2PMK
     
  •   External Ligand Annotations Hide
    Identifier   Binding Affinity (Sequence Identity %)
    128
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    128
    N/Ain BindingDB
    N/Ain BindingMoad
    Kd: 1200 nM - data from PDBbind  
     
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Data in orange boxes are gathered from external resources (when available).
 
 
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  •   Deposition Summary Hide
    Authors:   Oswald, C.,  Jenewein, S.,  Holland, I.B.,  Schmitt, L.

    Deposition:   2007-04-23
    Release:   2008-02-05
    Last Modified (REVDAT):   2011-07-13
     
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    2011-07-13
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    2011-07-13
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  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   1.60
    R-Value: 0.193 (obs.)
    R-Free: 0.223
    Space Group: C 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 179.68 α = 90.00 
    b = 34.65 β = 98.07 
    c = 38.29 γ = 90.00