2PA1

Structure of the PDZ domain of human PDLIM2 bound to a C-terminal extension from human beta-tropomyosin


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.253
  • R-Value Work: 0.192

Literature

Macromolecules
Sequence Display for 2PA1

Classification: METAL BINDING PROTEIN

Total Structure Weight: 9419.63

Macromolecule Entities
Molecule Chains Length Organism Details
PDZ and LIM domain protein 2 A 87 Homo sapiens Gene Name(s): PDLIM2 Gene View PP6345
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CL
Query on CL

A CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.253
  • R-Value Work: 0.192
  • Space Group: P 61

Unit Cell:

Length (Å) Angle (°)
a = 58.77 α = 90.00
b = 58.77 β = 90.00
c = 52.34 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2007-03-27
  • Released Date: 2007-05-01
  • Deposition author(s): Uppenberg, J., Shrestha, L., Elkins, J., Burgess-Brown, N., Salah, E., Bunkoczi, G., Papagrigoriou, E., Pike, A.C.W., Turnbull, A.P., Ugochukwu, E., Umeano, C., von Delft, F., Weigelt, J., Arrowsmith, C.H., Edwards, A., Sundstrom, M., Doyle, D.A., Structural Genomics Consortium (SGC)

Revision History

  • Version 1_0: 2007-05-01

    Type: Initial release

  • Version 1_1: 2008-05-01

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Advisory, Version format compliance

  • Version 1_3: 2017-10-18

    Type: Refinement description