2O7C

Crystal structure of L-methionine-lyase from Pseudomonas


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.224
  • R-Value Work: 0.204

Literature

Macromolecules
Sequence Display for 2O7C

Classification: LYASE

Total Structure Weight: 171991.19

Macromolecule Entities
Molecule Chains Length Organism Details
Methionine gamma-lyase A, B, C, D 398 Pseudomonas putida EC#: 4.4.1.11 IUBMB
Gene Name(s): mdeA
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A, B, C, D SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
LLP
Query on LLP
A, B, C, D L-PEPTIDE LINKING C14 H22 N3 O7 P LYS

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.224
  • R-Value Work: 0.204
  • Space Group: P 43 21 2

Unit Cell:

Length (Å) Angle (°)
a = 133.13 α = 90.00
b = 133.13 β = 90.00
c = 215.24 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2006-12-10
  • Released Date: 2007-12-11
  • Deposition author(s): Misaki, S., Takimoto, A., Takakura, T., Yoshioka, T., Yamashita, M., Tamura, T., Tanaka, H., Inagaki, K.

Revision History

  • Version 1_0: 2007-12-11

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Derived calculations, Version format compliance