2O3O

Crystal Structure of the sensor histidine kinase regulator YycI from Bacillus subtitlis


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.89 Å
  • R-Value Free: 0.262
  • R-Value Work: 0.212

Literature

Macromolecules
Sequence Display for 2O3O

Classification: SIGNALING PROTEIN

Total Structure Weight: 355848.53

Macromolecule Entities
Molecule Chains Length Organism Details
YycI protein A, B, C..., D, E, F, G, H, I, J, K, LA, B, C, D, E, F, G, H, I, J, K, L 254 Bacillus subtilis Fragment: Periplasmic domain
Mutation: M47M, M89M, M91M, M103M, M167M, M204M
Gene Name(s): yycI BSU40380
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CL
Query on CL

A, D, E, F, K, L CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B, C, D, E, F, G, H, I, J, K, L L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.89 Å
  • R-Value Free: 0.262
  • R-Value Work: 0.212
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 60.79 α = 90.00
b = 161.92 β = 90.90
c = 180.16 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2006-12-01
  • Released Date: 2007-04-10
  • Deposition author(s): Santelli, E., Liddington, R.C.

Revision History

  • Version 1_0: 2007-04-10

    Type: Initial release

  • Version 1_1: 2008-05-01

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Advisory, Refinement description, Version format compliance