2NZX

Crystal Structure of alpha1,3-Fucosyltransferase with GDP


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.237
  • R-Value Work: 0.190

Literature

Macromolecules
Sequence Display for 2NZX

Classification: TRANSFERASE

Total Structure Weight: 130795.74

Macromolecule Entities
Molecule Chains Length Organism Details
Alpha1,3-fucosyltransferase A, B, C 371 Helicobacter pylori EC#: 2.4.1.152 IUBMB
Fragment: C-termincal truncated domain
Gene Name(s): fucT
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GDP
Query on GDP

A, B, C GUANOSINE-5'-DIPHOSPHATE
C10 H15 N5 O11 P2
QGWNDRXFNXRZMB-UUOKFMHZSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

C SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.237
  • R-Value Work: 0.190
  • Space Group: P 21 21 2

Unit Cell:

Length (Å) Angle (°)
a = 104.15 α = 90.00
b = 136.25 β = 90.00
c = 96.38 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2006-11-27
  • Released Date: 2007-01-23
  • Deposition author(s): Sun, H.Y., Ko, T.P.

Revision History

  • Version 1_0: 2007-01-23

    Type: Initial release

  • Version 1_1: 2008-05-01

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance

  • Version 1_3: 2017-07-05

    Type: Database references