2NZL

Crystal structure of human hydroxyacid oxidase 1

Structural Biology Knowledgebase: 2NZL SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.35 Å
  • R-Value Free: 0.155
  • R-Value Work: 0.126

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2NZL

Classification: OXIDOREDUCTASE

Total Structure Weight: 44065.78

Macromolecule Entities
Molecule Chains Length Organism Details
Hydroxyacid oxidase 1 A 392 Homo sapiens EC#: 1.1.3.15 IUBMB
Gene Name(s): HAO1 Gene View GOX1 HAOX1

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FMN
Query on FMN

A FLAVIN MONONUCLEOTIDE
RIBOFLAVIN MONOPHOSPHATE (Synonym)
C17 H21 N4 O9 P
FVTCRASFADXXNN-SCRDCRAPSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GLV
Query on GLV

A GLYOXYLIC ACID
GLYOXALATE, GLYOXYLATE (Synonym)
C2 H2 O3
HHLFWLYXYJOTON-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.35 Å
  • R-Value Free: 0.155
  • R-Value Work: 0.126
  • Space Group: I 4

Unit Cell:

Length (Å) Angle (°)
a = 97.29 α = 90.00
b = 97.29 β = 90.00
c = 79.87 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2006-11-24
  • Released Date: 2006-12-12
  • Deposition author(s): Ugochukwu, E., Kavanagh, K., Pilka, E., Berridge, G., Debreczeni, J.E., Papagrigoriou, E., Turnbull, A., Niesen, F., Gileadi, O., Von Delft, F., Sundstrom, M., Arrowsmith, C.H., Weigelt, J., Edwards, A., Oppermann, U., Structural Genomics Consortium (SGC)

Revision History

  • 2011-07-13
    Type: Biological assembly | Details: Added software calculated values
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4