Download MendeleyStructure-reactivity correlations and kinetic isotope effects in aromatic amine dehydrogenase
Hothi, P., Roujeinikova, A., Sutcliffe, M.J., Cullis, P., Leys, D., Scrutton, N.S.To be published.
2HKR
Structures of the carbinolamine and schiff-base intermediates in the reductive half-reaction of aromatic amine dehydrogenase (AADH) with p-methoxyphenylethylamine
- PDB DOI: https://doi.org/10.2210/pdb2HKR/pdb
- Classification: OXIDOREDUCTASE
- Organism(s): Alcaligenes faecalis
- Expression System: Escherichia coli
- Mutation(s): Yes
- Deposited: 2006-07-05 Released: 2008-04-01
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.40 Å
- R-Value Free: 0.171
- R-Value Work: 0.149
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Aromatic amine dehydrogenase, small subunit | A [auth D], B [auth H] | 122 | Alcaligenes faecalis | Mutation(s): 1 EC: 1.4.99.4 |  |
UniProt | |||||
Find proteins for P84887 (Alcaligenes faecalis) Explore P84887 Go to UniProtKB: P84887 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P84887 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 2 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Aromatic amine dehydrogenase, large subunit | C [auth A], D [auth B] | 362 | Alcaligenes faecalis | Mutation(s): 0 Gene Names: aauB EC: 1.4.99.4 |  |
UniProt | |||||
Find proteins for P84888 (Alcaligenes faecalis) Explore P84888 Go to UniProtKB: P84888 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P84888 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| ZHZ Query on ZHZ | F [auth H] | 2-(4-METHOXYPHENYL)ACETAMIDE C9 H11 N O2 OLKQIWCQICCYQS-UHFFFAOYSA-N |  | ||
| ZHH Query on ZHH | E [auth D] | 2-(4-METHOXYPHENYL)ETHANAMINE C9 H13 N O LTPVSOCPYWDIFU-UHFFFAOYSA-N |  | ||
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| TRQ Query on TRQ | A [auth D], B [auth H] | L-PEPTIDE LINKING | C11 H10 N2 O4 |  | TRP |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.40 Å
- R-Value Free: 0.171
- R-Value Work: 0.149
- Space Group: P 1 21 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 70.848 | α = 90 |
| b = 88.813 | β = 90.39 |
| c = 80.044 | γ = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| PDB_EXTRACT | data extraction |
| MOSFLM | data reduction |
| SCALA | data scaling |
Entry History
Deposition Data
- Released Date: 2008-04-01 Deposition Author(s): Roujeinikova, A., Leys, D.
Revision History (Full details and data files)
- Version 1.0: 2008-04-01
Type: Initial release - Version 1.1: 2011-07-13
Changes: Derived calculations, Version format compliance
