2H2G

The Structural Basis of Sirtuin substrate affinity


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.63 Å
  • R-Value Free: 0.226
  • R-Value Work: 0.198

Literature

Macromolecules
Sequence Display for 2H2G

Classification: HYDROLASE

Total Structure Weight: 29070.22

Macromolecule Entities
Molecule Chains Length Organism Details
NAD-dependent deacetylase A 246 Thermotoga maritima EC#: 3.5.1 IUBMB
Gene Name(s): cobB sir2 TM_0490
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
HISTONE H3 PEPTIDE B 11 Saccharomyces cerevisiae Mutation: A118T
Gene Name(s): HHT1 YBR010W YBR0201 HHT2 SIN2 YNL031C N2749
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ZN
Query on ZN

A ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
ALY
Query on ALY
B L-PEPTIDE LINKING C8 H16 N2 O3 LYS

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.63 Å
  • R-Value Free: 0.226
  • R-Value Work: 0.198
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 46.22 α = 90.00
b = 58.15 β = 90.00
c = 109.06 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2006-05-18
  • Released Date: 2006-11-28
  • Deposition author(s): Cosgrove, M.S., Wolberger, C.

Revision History

  • Version 1_0: 2006-11-28

    Type: Initial release

  • Version 1_1: 2008-05-01

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance

  • Version 1_3: 2012-06-27

    Type: Structure summary