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Complex Of Gs- With The Catalytic Domains Of Mammalian Adenylyl Cyclase: Complex With TNP-ATP and Mn
2GVD
Primary Citation
 
 
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  •   Molecular Description Hide
    Classification: Lyase
    Structure Weight: 97022.32
    Molecule: Adenylate cyclase type 5
    Polymer: 1 Type: protein Length: 225
    Chains: A
    EC#: 4.6.1.1   
    Fragment: C1A domain, residues 440-657
    Organism Canis lupus familiaris
    Gene Name ADCY5
    UniProtKB:   Protein Feature View | Search PDB | P30803  
    Molecule: Adenylate cyclase type 2
    Polymer: 2 Type: protein Length: 212
    Chains: B
    EC#: 4.6.1.1   
    Fragment: C2A domain, residues 870-1081
    Organism Rattus norvegicus
    Gene Name Adcy2
    UniProtKB:   Protein Feature View | Search PDB | P26769  
    Molecule: Guanine nucleotide-binding protein G(s), alpha subunit
    Polymer: 3 Type: protein Length: 394
    Chains: C
    Organism Bos taurus
    Gene Names GNAS GNAS1
    UniProtKB:   Protein Feature View | Search PDB | P04896  
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Canis lupus familiaris   Taxonomy   Common Name: Dog Expression System: Escherichia coli bl21  
    Polymer: 2
    Scientific Name: Rattus norvegicus   Taxonomy   Common Name: Norway rat Expression System: Escherichia coli bl21  
    Polymer: 3
    Scientific Name: Bos taurus   Taxonomy   Common Name: Cattle Expression System: Escherichia coli bl21  
     
  •   Related PDB Entries Hide
    Identifier Details
    1TL7  Complex Of Gs- With The Catalytic Domains Of Mammalian Adenylyl Cyclase: Complex With 2'(3')-O-(N-methylanthraniloyl)-guanosine 5'-triphosphate and Mn 
    1U0H  Structural basis for the inhibition of mammalian adenylyl cyclase by MANT-GTP 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name Interactions
    128
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    128 C16 H17 N8 O19 P3
    SPIRO(2,4,6-TRINITROBENZENE[1,2A]-2O',3O'- METHYLENE-ADENINE-TRIPHOSPHATE
    128:2GVD
    CL
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    CL Cl
    CHLORIDE ION
    FKP
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    FKP C30 H50 N2 O7
    METHYLPIPERAZINOFORSKOLIN
    FKP:2GVD
    GSP
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    GSP C10 H16 N5 O13 P3 S
    5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE
    GSP:2GVD
    MN
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    MN Mn
    MANGANESE (II) ION
     
  •   External Ligand Annotations Hide
    Identifier   Binding Affinity (Sequence Identity %)
    128
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    128
    N/Ain BindingDB
    N/Ain BindingMoad
    Ki: 100 nM - data from PDBbind  
     
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Data in orange boxes are gathered from external resources (when available).
 
 
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  •   Deposition Summary Hide
    Authors:   Mou, T.-C.,  Sprang, S.R.

    Deposition:   2006-05-02
    Release:   2006-07-04
    Last Modified (REVDAT):   2011-11-16
     
  •   Revision History    Hide
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    2011-11-16
    Atom occupancy
    2011-07-13
    Version format compliance
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   2.90
    R-Value: 0.245 (obs.)
    R-Free: 0.279
    Space Group: P 21 21 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 118.20 α = 90.00 
    b = 133.40 β = 90.00 
    c = 70.60 γ = 90.00