Crystal structure of Salinosporamide A in complex with the yeast 20S proteasome DOI:10.2210/pdb2fak/pdb

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Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: Hydrolase Structure Weight: 705887.01 Molecule: Proteasome component Y7 Polymer: 1 Type: protein Length: 250 Chains: A, O EC#: 3.4.25.1    Organism Saccharomyces cerevisiae Gene Names PRE8 PRS4 YML092C UniProtKB:   Protein Feature View | Search PDB | P23639     Molecule: Proteasome component Y13 Polymer: 2 Type: protein Length: 244 Chains: B, P EC#: 3.4.25.1    Organism Saccharomyces cerevisiae Gene Names PRE9 PRS5 YGR135W UniProtKB:   Protein Feature View | Search PDB | P23638     Molecule: Proteasome component PRE6 Polymer: 3 Type: protein Length: 241 Chains: C, Q EC#: 3.4.25.1    Organism Saccharomyces cerevisiae Gene Names PRE6 YOL038W UniProtKB:   Protein Feature View | Search PDB | P40303     Molecule: Proteasome component PUP2 Polymer: 4 Type: protein Length: 242 Chains: D, R EC#: 3.4.25.1    Organism Saccharomyces cerevisiae Gene Names PUP2 DOA5 YGR253C G9155 UniProtKB:   Protein Feature View | Search PDB | P32379     Molecule: Proteasome component PRE5 Polymer: 5 Type: protein Length: 233 Chains: E, S EC#: 3.4.25.1    Organism Saccharomyces cerevisiae Gene Names PRE5 YMR314W YM9924.06 UniProtKB:   Protein Feature View | Search PDB | P40302     Molecule: Proteasome component C1 Polymer: 6 Type: protein Length: 244 Chains: F, T EC#: 3.4.25.1    Organism Saccharomyces cerevisiae Gene Names PRE10 PRC1 PRS1 YOR362C O6650 UniProtKB:   Protein Feature View | Search PDB | P21242     Molecule: Proteasome component C7-alpha Polymer: 7 Type: protein Length: 243 Chains: G, U EC#: 3.4.25.1    Organism Saccharomyces cerevisiae Gene Names SCL1 PRC2 PRS2 YGL011C UniProtKB:   Protein Feature View | Search PDB | P21243     Molecule: Proteasome component PUP1 Polymer: 8 Type: protein Length: 222 Chains: H, V EC#: 3.4.25.1    Organism Saccharomyces cerevisiae Gene Names PUP1 YOR157C UniProtKB:   Protein Feature View | Search PDB | P25043     Molecule: Proteasome component PUP3 Polymer: 9 Type: protein Length: 204 Chains: I, W EC#: 3.4.25.1    Organism Saccharomyces cerevisiae Gene Names PUP3 YER094C UniProtKB:   Protein Feature View | Search PDB | P25451     Molecule: Proteasome component C11 Polymer: 10 Type: protein Length: 198 Chains: J, X EC#: 3.4.25.1    Organism Saccharomyces cerevisiae Gene Names PRE1 YER012W UniProtKB:   Protein Feature View | Search PDB | P22141     Molecule: Proteasome component PRE2 Polymer: 11 Type: protein Length: 212 Chains: K, Y EC#: 3.4.25.1    Organism Saccharomyces cerevisiae Gene Names PRE2 DOA3 PRG1 YPR103W P8283.10 UniProtKB:   Protein Feature View | Search PDB | P30656     Molecule: Proteasome component C5 Polymer: 12 Type: protein Length: 222 Chains: L, Z EC#: 3.4.25.1    Organism Saccharomyces cerevisiae Gene Names PRE7 PRS3 PTS1 YBL041W YBL0407 UniProtKB:   Protein Feature View | Search PDB | P23724     Molecule: Proteasome component PRE4 Polymer: 13 Type: protein Length: 233 Chains: 1, M EC#: 3.4.25.1    Organism Saccharomyces cerevisiae Gene Names PRE4 YFR050C UniProtKB:   Protein Feature View | Search PDB | P30657     Molecule: Proteasome component PRE3 Polymer: 14 Type: protein Length: 196 Chains: 2, N EC#: 3.4.25.1    Organism Saccharomyces cerevisiae Gene Names PRE3 YJL001W J1407 UniProtKB:   Protein Feature View | Search PDB | P38624         Source Hide Polymer: 1 Scientific Name: Saccharomyces cerevisiae   Taxonomy   Common Name: Baker's yeast   Polymer: 2 Scientific Name: Saccharomyces cerevisiae   Taxonomy   Common Name: Baker's yeast   Polymer: 3 Scientific Name: Saccharomyces cerevisiae   Taxonomy   Common Name: Baker's yeast   Polymer: 4 Scientific Name: Saccharomyces cerevisiae   Taxonomy   Common Name: Baker's yeast   Polymer: 5 Scientific Name: Saccharomyces cerevisiae   Taxonomy   Common Name: Baker's yeast   Polymer: 6 Scientific Name: Saccharomyces cerevisiae   Taxonomy   Common Name: Baker's yeast   Polymer: 7 Scientific Name: Saccharomyces cerevisiae   Taxonomy   Common Name: Baker's yeast   Polymer: 8 Scientific Name: Saccharomyces cerevisiae   Taxonomy   Common Name: Baker's yeast   Polymer: 9 Scientific Name: Saccharomyces cerevisiae   Taxonomy   Common Name: Baker's yeast   Polymer: 10 Scientific Name: Saccharomyces cerevisiae   Taxonomy   Common Name: Baker's yeast   Polymer: 11 Scientific Name: Saccharomyces cerevisiae   Taxonomy   Common Name: Baker's yeast   Polymer: 12 Scientific Name: Saccharomyces cerevisiae   Taxonomy   Common Name: Baker's yeast   Polymer: 13 Scientific Name: Saccharomyces cerevisiae   Taxonomy   Common Name: Baker's yeast   Polymer: 14 Scientific Name: Saccharomyces cerevisiae   Taxonomy   Common Name: Baker's yeast       Related PDB Entries Hide Identifier Details 1IRU  Bovine liver 20S proteasome  1RYP  Yeast 20S proteasome      Ligand Chemical Component Hide Identifier Formula Name Interactions SA1 Search  Download  C15 H21 N O4 (3AR,6R,6AS)-6-((S)-((S)-CYCLOHEX-2-ENYL)(HYDROXY)METHYL)- 6A-METHYL-4-OXO-HEXAHYDRO-2H-FURO[3,2-C]PYRROLE- 6-CARBALDEHYDE   Ligand Explorer     External Domain Annotations Hide SCOP Classification v1.75: 28 Domains - data from SCOP   CATH Classification v3.4.0: 28 Domains - data from CATH   Pfam Classification: 22 Domains - data from Pfam   GO Terms: 244 Terms - data from GO      Structural Biology Knowledgebase Data Hide     Data in orange boxes are gathered from external resources (when available). 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Biological Assembly            View in 3D More Images... Biological assembly 1 assigned by authors and generated by PISA (software) Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol QuickPDB FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Groll, M.,  Potts, B.C. Deposition:   2005-12-07 Release:   2006-04-18 Last Modified (REVDAT):   2009-02-24     Revision History    Hide Mouse over text for details 2011-07-13 Version format compliance     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data:   Structure Factors EDS   Resolution[Å]:   2.80 R-Value: 0.229 (obs.) R-Free: 0.254 Space Group: P 21 Unit Cell:   Length [Å] Angles [°] a = 135.17 α = 90.00  b = 301.16 β = 112.82  c = 144.14 γ = 90.00      Molecule of the Month Hide Ubiquitin