Foot and Mouth Disease Virus RNA-dependent RNA polymerase in complex with uridylylated VPg protein
2F8E
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Transferase
    Structure Weight: 56166.46
    Molecule: RNA-dependent RNA polymerase
    Polymer: 1 Type: protein Length: 474
    Chains: X
    EC#: 2.7.7.48   
    Organism: Foot-and-mouth disease virus - type C
    UniProtKB: Search PDB | Q0QEE0   Protein Feature View
    Molecule: VPg protein
    Polymer: 2 Type: protein Length: 23
    Chains: A
    Organism: Foot-and-mouth disease virus - type Asia 1
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  •   Source Hide
    Polymer: 1
    Scientific Name: Foot-and-mouth disease virus - type c   Taxonomy   Expression System: Escherichia coli  
    Polymer: 2
    Scientific Name: Synthetic construct (Foot-and-mouth disease virus - type Asia 1)   Taxonomy    
     
  •   Related PDB Entries Hide
    Identifier Details
    1U09   Foot and Mouth Disease Virus RNA-dependent RNA polymerase 
    1WNE   Foot and Mouth Disease Virus RNA-dependent RNA polymerase in complex with template-primer RNA 
    2D7S   Foot and Mouth Disease Virus RNA-dependent RNA polymerase in complex with non-uridylylated VPg protein 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    MG
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    MG Mg
    MAGNESIUM ION
    MN
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    MN Mn
    MANGANESE (II) ION
    U5P
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    U5P C9 H13 N2 O9 P
    URIDINE-5'-MONOPHOSPHATE
    U5P:2F8E
     
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  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Ferrer-Orta, C.,  Arias, A.,  Perez-Luque, R.,  Escarmis, C.,  Domingo, E.,  Verdaguer, N.

    Deposition:   2005-12-02
    Release:   2006-03-28
    Last Modified (REVDAT):   2009-02-24
     
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    2011-07-13
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  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
    N/A
    Resolution[Å]:   2.90
    R-Value: 0.237 (obs.)
    R-Free: 0.284
    Space Group: P 32 2 1
    Unit Cell:
      Length [Å] Angles [°]
    a = 94.38 α = 90.00 
    b = 94.38 β = 90.00 
    c = 99.73 γ = 120.00