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Foot-and-mouth disease virus RNA-dependent RNA polymerase in complex with a template-primer RNA and with ribavirin
DOI:10.2210/pdb2e9r/pdb   NDB ID: PR0262
2E9R
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Transferase/rna
    Structure Weight: 58748.75
    Molecule: 5'-R(*CP*AP*UP*GP*GP*GP*CP*CP*C)-3'
    Polymer: 1 Type: rna Length: 9
    Chains: A
    Details: RNA template
    Molecule: 5'-R(*CP*CP*C*GP*GP*GP*CP*CP*C)-3'
    Polymer: 2 Type: rna Length: 6
    Chains: B
    Details: RNA primer
    Molecule: RNA-dependent RNA polymerase
    Polymer: 3 Type: protein Length: 476
    Chains: X
    EC#: 2.7.7.48   
    Organism Foot-and-mouth disease virus C-S8c1
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  •   Structure Validation Hide

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  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 2
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 3
    Scientific Name: Foot-and-mouth disease virus c-s8c1   Taxonomy   Expression System: Escherichia coli bl21  
     
  •   Related PDB Entries Hide
    Identifier Details
    1U09  Foot-and-mouth disease virus RNA-dependent RNA polymerase. 
    1WNE  Foot and mouth disease virus RNA-dependent RNA polymerase in complex with a template-primer RNA. 
    2D7S  Foot and mouth disease virus RNA-dependent RNA polymerase in complex with protein-primer VPg. 
    2E9T   
    2E9Z   
    2F8E  Foot and mouth disease virus RNA-dependent RNA polymerase in complex with protein-primer VPg uridilated. 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    MG
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    MG Mg
    MAGNESIUM ION
    RTP
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    RTP C8 H15 N4 O14 P3
    RIBAVIRIN TRIPHOSPHATE
    RTP:2E9R
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure: PR0262
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors
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