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ATP-DEPENDENT DNA LIGASE FROM PYROCOCCUS FURIOSUS
2CFM
Primary Citation
 
 
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  •   Molecular Description Hide
    Classification: Ligase
    Structure Weight: 64991.83
    Molecule: THERMOSTABLE DNA LIGASE
    Polymer: 1 Type: protein Length: 561
    Chains: A
    EC#: 6.5.1.1   
    Details: AMP IS BOUND IN THE POCKET NON-COVALENTLY
    Organism Pyrococcus furiosus
    Gene Names lig PF1635
    UniProtKB:   Protein Feature View | Search PDB | P56709  
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Pyrococcus furiosus   Taxonomy   Expression System: Escherichia coli  
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name Interactions
    AMP
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    Download      		AMP C10 H14 N5 O7 P
    ADENOSINE MONOPHOSPHATE
    		AMP:2CFM
    MG
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    Download      		MG Mg
    MAGNESIUM ION
     
  •   Modified Residues Hide
    Identifier Formula Parent Type
    MSE
    Search      		MSE C5 H11 N O2 Se MET lPeptideLinking
     
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  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
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  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PQS (software)
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  •   Deposition Summary Hide
    Authors:   Nishida, H.,  Ishino, Y.,  Morikawa, K.

    Deposition:   2006-02-22
    Release:   2006-07-12
    Last Modified (REVDAT):   2009-02-24
     
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    2011-07-13
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  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   1.80
    R-Value: 0.204 (obs.)
    R-Free: 0.231
    Space Group: P 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 60.87 α = 90.00 
    b = 87.40 β = 109.22 
    c = 62.65 γ = 90.00