1YKC

human glutathione S-transferase m2-2 (E.C.2.5.1.18) complexed with glutathione-disulfide

Structural Biology Knowledgebase: 1YKC SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.254
  • R-Value Work: 0.206

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1YKC

Classification: TRANSFERASE

Total Structure Weight: 52516.54

Macromolecule Entities
Molecule Chains Length Organism Details
Glutathione S-transferase Mu 2 A, B 217 Homo sapiens EC#: 2.5.1.18 IUBMB
Gene Name(s): GSTM2 Gene View GST4
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GDS
Query on GDS

A, B OXIDIZED GLUTATHIONE DISULFIDE
C20 H32 N6 O12 S2
YPZRWBKMTBYPTK-BJDJZHNGSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.254
  • R-Value Work: 0.206
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 56.61 α = 90.00
b = 74.79 β = 90.00
c = 116.50 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2005-01-17
  • Released Date: 2005-01-25
  • Deposition author(s): Patskovsky, Y.V., Patskovska, L.N., Listowsky, I., Almo, S.C.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4