Download MendeleyCrystal Structure of Psychrophilic Subtilisin-like Serine Protease from Antarctic Psychrotroph Pseudoalteromonas sp. AS-11 at 0.14 nm resolution
Dong, D., Watanabe, K.To be published.
1Y9Z
Crystal Structure of Psychrophilic Subtilisin-like Serine Protease from Antarctic Psychrotroph Pseudoalteromonas sp. AS-11 at 0.14 nm resolution
- PDB DOI: https://doi.org/10.2210/pdb1Y9Z/pdb
- Classification: HYDROLASE
- Organism(s): Pseudoalteromonas sp. AS-11
- Mutation(s): No
- Deposited: 2004-12-16 Released: 2006-03-21
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.40 Å
- R-Value Free: 0.207
- R-Value Work: 0.197
- R-Value Observed: 0.197
This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| alkaline serine protease | 441 | Pseudoalteromonas sp. AS-11 | Mutation(s): 0 EC: 3.4.21 |  | |
UniProt | |||||
Find proteins for Q65Z69 (Pseudoalteromonas sp. AS-11) Explore Q65Z69 Go to UniProtKB: Q65Z69 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q65Z69 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Ligands 5 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| PMS Query on PMS | H [auth A], O [auth B] | phenylmethanesulfonic acid C7 H8 O3 S NIXKBAZVOQAHGC-UHFFFAOYSA-N |  | ||
| TRS Query on TRS | I [auth A] | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL C4 H12 N O3 LENZDBCJOHFCAS-UHFFFAOYSA-O |  | ||
| SO4 Query on SO4 | G [auth A], N [auth B] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |  | ||
| CA Query on CA | C [auth A], D [auth A], J [auth B], K [auth B] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N |  | ||
| NA Query on NA | E [auth A], F [auth A], L [auth B], M [auth B] | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.40 Å
- R-Value Free: 0.207
- R-Value Work: 0.197
- R-Value Observed: 0.197
- Space Group: C 1 2 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 122.09 | α = 90 |
| b = 138.32 | β = 97.49 |
| c = 64.79 | γ = 90 |
| Software Name | Purpose |
|---|---|
| CNS | refinement |
| HKL-2000 | data reduction |
| SCALEPACK | data scaling |
| CNS | phasing |
Entry History
Deposition Data
- Released Date: 2006-03-21 Deposition Author(s): Dong, D., Watanabe, K.
Revision History (Full details and data files)
- Version 1.0: 2006-03-21
Type: Initial release - Version 1.1: 2008-04-30
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Source and taxonomy, Version format compliance - Version 1.3: 2023-10-25
Changes: Data collection, Database references, Derived calculations, Refinement description
