1XQ7

Cyclophilin from Trypanosoma cruzi bound to cyclosporin A

Structural Biology Knowledgebase: 1XQ7 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.07 Å
  • R-Value Free: 0.235
  • R-Value Work: 0.169

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1XQ7

Classification: ISOMERASE / IMMUNOSUPPRESSANT

Total Structure Weight: 57834.98

Macromolecule Entities
Molecule Chains Length Organism Details
PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A, B, C 166 Trypanosoma cruzi EC#: 5.2.1.8 IUBMB
Gene Name(s): Tc00.1047053508577.140
CYCLOSPORIN A D, E, F 11 Tolypocladium inflatum

Small Molecules
Biologically Interesting Molecules 1 Unique
ID Chains Name Type/Class 2D Diagram 3D Interactions
PRD_000142 (VAL,ABA,ALA,SAR,DAL,MVA,MLE,BMT) D, E, F Cyclosporin A Cyclic peptide /
Immunosuppressant
Ligand Explorer Electron Density (JSmol) Electron Density (JSmol) Electron Density (JSmol) Electron Density (JSmol) Electron Density (JSmol) Electron Density (JSmol) Electron Density (JSmol) Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.07 Å
  • R-Value Free: 0.235
  • R-Value Work: 0.169
  • Space Group: P 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 52.27 α = 110.49
b = 57.06 β = 108.21
c = 58.81 γ = 105.40

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2004-10-11
  • Released Date: 2004-12-21
  • Deposition author(s): Caruthers, J.M., Hol, W.G.J., Structural Genomics of Pathogenic Protozoa Consortium (SGPP)

Revision History

  • 2012-12-12
    Type: Other | Details: Add PRD info
  • 2011-07-27
    Type: Binding sites and description | Details: Binding sites and description
  • 2011-07-27
    Type: Non-polymer description | Details: Non-polymer description
  • 2011-07-27
    Type: Function and keywords | Details: Function and keywords
  • 2011-07-27
    Type: Linkage | Details: Linkage
  • 2011-07-27
    Type: Sequence database correspondence | Details: Sequence database correspondence
  • 2011-07-27
    Type: Polymer description | Details: Changed inhibitor presentation or chemistry
  • 2011-07-27
    Type: Atom nomenclature | Details: Atom nomenclature
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4