1VAI

Structure of e. coli cyclophilin B K163T mutant bound to n-acetyl-ala-ala-pro-ala-7-amino-4-methylcoumarin

Structural Biology Knowledgebase: 1VAI SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.229
  • R-Value Work: 0.188

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1VAI

Classification: isomerase

Total Structure Weight: 36652.58

Macromolecule Entities
Molecule Chains Length Organism Details
cyclophilin B A, B 166 Escherichia coli EC#: 5.2.1.8 IUBMB
Mutation: K163T
Gene Name(s): ppiA rot rotA b3363 JW3326
(ACE)AAPA(MCM) C 6 synthetic

Small Molecules
Biologically Interesting Molecules 1 Unique
ID Chains Name Type/Class 2D Diagram 3D Interactions
PRD_000424 C ACE-ALA-ALA-PRO-ALA-7-AMINO-4-METHYLCOUMARINN Peptide-like /
Inhibitor
Ligand Explorer

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.229
  • R-Value Work: 0.188
  • Space Group: P 32
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 78.73 α = 90.00
b = 78.73 β = 90.00
c = 56.16 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2004-02-17
  • Released Date: 2004-09-21
  • Deposition author(s): Konno, M., Sano, Y., Okudaira, K., Kawaguchi, Y., Yamagishi-Ohmori, Y., Fushinobu, S., Matsuzawa, H.

Revision History

  • 2013-02-27
    Type: Other | Details: Add PRD info
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4