SPINACH RUBISCO IN COMPLEX WITH 2-CARBOXYARABINITOL 2 BISPHOSPHATE AND CALCIUM. DOI:10.2210/pdb1upp/pdb

1UPP   Display Files  close FASTA Sequence PDB File PDB File (Header) mmCIF File mmCIF File (Header) PDBML/XML File PDBML/XML File (Header)   Download Files  close FASTA Sequence PDB File (Text) PDB File (gz) mmCIF File mmCIF File (gz) PDBML/XML File PDBML/XML File (gz) Structure Factor (Text) Structure Factor (gz) Biological Assembly (gz) (A+S)   Share this Page  close Facebook Twitter LinkedIn Email Link this Page

Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: Lyase Structure Weight: 271541.19 Molecule: RIBULOSE BISPHOSPHATE CARBOXYLASE LARGE CHAIN Polymer: 1 Type: protein Length: 475 Chains: A, C, E, G EC#: 4.1.1.39    Organism Spinacia oleracea Gene Name rbcL UniProtKB:   Protein Feature View | Search PDB | P00875     Molecule: RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN Polymer: 2 Type: protein Length: 123 Chains: I, J, K, L EC#: 4.1.1.39    Details: THIS IS THE SECOND STRUCTURE OF THIS COMPLEX THAT IS BEING SUBMITTED. THE PREVOUS STRUCTURE, PDB ID CODE 1UPM, WAS OBTAINED FROM A CRYSTAL OF RUBISCO-CA COOCRYSTALLIZED WITH 2-CABP WHERAS THIS STRUCTURE IS FROM A RUBISCO-CA/3PGA CRYSTAL WHICH WAS SOAKED WITH 2-CABP Organism Spinacia oleracea Gene Name RBCS2 UniProtKB:   Protein Feature View | Search PDB | Q43832         Source Hide Polymer: 1 Scientific Name: Spinacia oleracea   Taxonomy   Common Name: Spinach   Polymer: 2 Scientific Name: Spinacia oleracea   Taxonomy   Common Name: Spinach       Related PDB Entries Hide Identifier Details 1AA1  ACTIVATED SPINACH RUBISCO IN COMPLEX WITH THE PRODUCT 3-PHOSPHOGLYCERATE  1AUS  ACTIVATED UNLIGANDED SPINACH RUBISCO  1IR1  CRYSTAL STRUCTURE OF SPINACH RIBULOSE-1,5- BISPHOSPHATECARBOXYLASE/OXYGENASE (RUBISCO) COMPLEXED WITH CO2, MG2+AND 2- CARBOXYARABINITOL-1,5-BISPHOSPHATE  1RBO  SPINACH RUBISCO IN COMPLEX WITH THE INHIBITOR 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE  1RCO  SPINACH RUBISCO IN COMPLEX WITH THE INHIBITOR D-XYLULOSE-2,2-DIOL-1,5- BISPHOSPHATE  1RCX  NON-ACTIVATED SPINACH RUBISCO IN COMPLEX WITH ITS SUBSTRATE RIBULOSE-1,5-BISPHOSPHATE  1RXO  ACTIVATED SPINACH RUBISCO IN COMPLEX WITH ITS SUBSTRATE RIBULOSE-1,5-BISPHOSPHATE AND CALCIUM  1UPM  ACTIVATED SPINACH RUBISCO COMPLEXED WITH 2-CARBOXYARABINITOL 2 BISPHOSPHAT AND CA2+  8RUC  ACTIVATED SPINACH RUBISCO COMPLEXED WITH 2- CARBOXYARABINITOL BISPHOSPHATE      Ligand Chemical Component Hide Identifier Formula Name Interactions CA Search  Download  Ca CALCIUM ION   Ligand Explorer CAP Search  Download  C6 H14 O13 P2 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE   Ligand Explorer     Modified Residues Hide Identifier Formula Parent Type KCX Search  C7 H14 N2 O4 LYS lPeptideLinking     External Domain Annotations Hide CATH Classification v3.4.0: 12 Domains - data from CATH   Pfam Classification: 3 Domains - data from Pfam   GO Terms: 13 Terms - data from GO      Structural Biology Knowledgebase Data Hide     Data in orange boxes are gathered from external resources (when available). Reset Layout

Biological Assembly            View in 3D More Images... Biological assembly 1 assigned by authors and generated by PQS (software) Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol QuickPDB FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Karkehabadi, S.,  Taylor, T.C.,  Andersson, I. Deposition:   2003-10-09 Release:   2003-10-14 Last Modified (REVDAT):   2009-02-24     Revision History    Hide Mouse over text for details 2011-07-13 Version format compliance     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data:   Structure Factors EDS   Resolution[Å]:   2.30 R-Value: 0.259 (obs.) R-Free: 0.307 Space Group: C 2 2 21 Unit Cell:   Length [Å] Angles [°] a = 155.88 α = 90.00  b = 156.25 β = 90.00  c = 199.75 γ = 90.00      Molecule of the Month Hide Rubisco