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Rat Protein Geranylgeranyltransferase Type-I Complexed with a GGPP analog and a RRCVLL Peptide Derived from Cdc42 splice isoform-2
1TNZ
Primary Citation
 
 
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  •   Molecular Description Hide
    Classification: Transferase
    Structure Weight: 527371.73
    Molecule: geranylgeranyltransferase type I alpha subunit
    Polymer: 1 Type: protein Length: 377
    Chains: A, C, E, G, I, K
    EC#: 2.5.1.58    2.5.1.59   
    Organism Rattus norvegicus
    Gene Name Fnta
    UniProtKB:   Protein Feature View | Search PDB | Q04631  
    Molecule: Geranylgeranyl transferase type I beta subunit
    Polymer: 2 Type: protein Length: 377
    Chains: B, D, F, H, J, L
    EC#: 2.5.1.59   
    Organism Rattus norvegicus
    Gene Name Pggt1b
    UniProtKB:   Protein Feature View | Search PDB | P53610  
    Molecule: Cell division control protein 42 homolog (Cdc42)
    Polymer: 3 Type: protein Length: 6
    Chains: M, N, O, P, Q, R
    Fragment: C-terminal residues 186-191
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Rattus norvegicus   Taxonomy   Common Name: Norway rat Expression System: Spodoptera frugiperda  
    Polymer: 2
    Scientific Name: Rattus norvegicus   Taxonomy   Common Name: Norway rat Expression System: Spodoptera frugiperda  
    Polymer: 3
    Scientific Name: Synthetic construct   Taxonomy    
     
  •   Related PDB Entries Hide
    Identifier Details
    1D8D  Co-Crystal Structure Of Rat Protein Farnesyltransferase Complexed With A K-Ras4B Peptide Substrate and Fpp Analog At 2.0A Resolution 
    1N4P  Protein Geranylgeranyltransferase Type-I Complexed With Geranylgeranyl Diphosphate 
    1N4Q  Protein Geranylgeranyltransferase Type-I Complexed With A Ggpp Analog and A Kkksktkcvil Peptide 
    1QBQ  Structure Of Rat Farnesyl Protein Transferase Complexed With A Cvim Peptide and -Hydroxyfarnesylphosphonic Acid 
    1TN6   
    1TN7   
    1TN8   
    1TNB   
    1TNO   
    1TNU   
    1TNY   
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name Interactions
    CL
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    Download      		CL Cl
    CHLORIDE ION
    MES
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    Download      		MES C6 H13 N O4 S
    2-(N-MORPHOLINO)-ETHANESULFONIC ACID
    MGM
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    Download      		MGM C19 H37 N O7 P2
    2-[METHYL-(5-GERANYL-4-METHYL-PENT-3-ENYL)- AMINO]-ETHYL-DIPHOSPHATE
    ZN
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    Download      		ZN Zn
    ZINC ION
     
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  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
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  Biological Assembly 1       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Reid, T.S.,  Terry, K.L.,  Casey, P.J.,  Beese, L.S.

    Deposition:   2004-06-11
    Release:   2004-11-02
    Last Modified (REVDAT):   2011-05-04
     
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    2011-07-13
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  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   2.90
    R-Value: 0.199 (obs.)
    R-Free: 0.218
    Space Group: C 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 271.26 α = 90.00 
    b = 266.92 β = 131.91 
    c = 185.75 γ = 90.00