1TDH

Crystal structure of human endonuclease VIII-like 1 (NEIL1)

Structural Biology Knowledgebase: 1TDH SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.231
  • R-Value Work: 0.194

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1TDH

Classification: HYDROLASE

Total Structure Weight: 41043.44

Macromolecule Entities
Molecule Chains Length Organism Details
nei endonuclease VIII-like 1 A 364 Homo sapiens EC#: 3.2.2 IUBMB 4.2.99.18 IUBMB
Mutation: N147S, K242R
Gene Name(s): NEIL1 Gene View

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
TRS
Query on TRS

A 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
TRIS BUFFER (Synonym)
C4 H12 N O3
LENZDBCJOHFCAS-UHFFFAOYSA-O
Ligand Explorer
 
JSmol

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.231
  • R-Value Work: 0.194
  • Space Group: H 3
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 132.19 α = 90.00
b = 132.19 β = 90.00
c = 51.09 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2004-05-22
  • Released Date: 2004-07-20
  • Deposition author(s): Doublie, S., Bandaru, V., Bond, J.P., Wallace, S.S.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4