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Structural basis for transcription regulation by alarmone ppGpp
1SMY
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Transferase
    Structure Weight: 862940.90
    Molecule: DNA-directed RNA polymerase alpha chain
    Polymer: 1 Type: protein Length: 315
    Chains: A, B, K, L
    EC#: 2.7.7.6   
    Organism Thermus thermophilus
    Gene Name rpoA
    UniProtKB:   Protein Feature View | Search PDB | Q9Z9H6  
    Molecule: DNA-directed RNA polymerase beta chain
    Polymer: 2 Type: protein Length: 1119
    Chains: C, M
    EC#: 2.7.7.6   
    Organism Thermus thermophilus
    Gene Names rpoB TTHA1813
    UniProtKB:   Protein Feature View | Search PDB | Q8RQE9  
    Molecule: DNA-directed RNA polymerase beta' chain
    Polymer: 3 Type: protein Length: 1524
    Chains: D, N
    EC#: 2.7.7.6   
    Organism Thermus thermophilus
    Gene Names rpoC TTHA1812
    UniProtKB:   Protein Feature View | Search PDB | Q8RQE8  
    Molecule: RNA POLYMERASE OMEGA SUBUNIT
    Polymer: 4 Type: protein Length: 99
    Chains: E, O
    EC#: 2.7.7.6   
    Organism Thermus thermophilus
    Gene Names rpoZ TTHA1561
    UniProtKB:   Protein Feature View | Search PDB | Q8RQE7  
    Molecule: principal sigma factor
    Polymer: 5 Type: protein Length: 423
    Chains: F, P
    Organism Thermus thermophilus
    Gene Names sigA rpoD TT_C0164
    UniProtKB:   Protein Feature View | Search PDB | Q72L95  
     
  •   Structure Validation Hide

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  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Thermus thermophilus   Taxonomy    
    Polymer: 2
    Scientific Name: Thermus thermophilus   Taxonomy    
    Polymer: 3
    Scientific Name: Thermus thermophilus   Taxonomy    
    Polymer: 4
    Scientific Name: Thermus thermophilus   Taxonomy    
    Polymer: 5
    Scientific Name: Thermus thermophilus   Taxonomy    
     
  •   Related PDB Entries Hide
    Identifier Details
    1IW7  Same protein without substrate 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    G4P
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    G4P C10 H17 N5 O17 P4
    GUANOSINE-5',3'-TETRAPHOSPHATE
    MG
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    MG Mg
    MAGNESIUM ION
    ZN
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    ZN Zn
    ZINC ION
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly 1       
Biological assembly 1 assigned by authors
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