1SJH

HLA-DR1 complexed with a 13 residue HIV capsid peptide

Structural Biology Knowledgebase: 1SJH SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.25 Å
  • R-Value Free: 0.245
  • R-Value Work: 0.220

Literature

Macromolecules
Sequence Display for 1SJH

Classification: IMMUNE SYSTEM

Total Structure Weight: 72092.45

Macromolecule Entities
Molecule Chains Length Organism Details
HLA class II histocompatibility antigen, DR alpha chain A 180 Homo sapiens Fragment: Extracellular domain of HLA-DRA*0101
Gene Name(s): HLA-DRA Gene View HLA-DRA1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
HLA class II histocompatibility antigen, DRB1-1 beta chain B 190 Homo sapiens Fragment: Extracellular domain of HLA-DRB*0101
Gene Name(s): HLA-DRB1 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
GAG polyprotein C 13 Human immunodeficiency virus 1 Fragment: 13 residue Peptide from HIV-1 gag capsid protein
Gene Name(s): gag
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Enterotoxin type C-3 D 239 Staphylococcus aureus Fragment: SEC3 variant 3B2
Mutation: K43S, L45F, A46K, H47W
Gene Name(s): entC3
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.25 Å
  • R-Value Free: 0.245
  • R-Value Work: 0.220
  • Space Group: H 3
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 172.46 α = 90.00
b = 172.46 β = 90.00
c = 121.46 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2004-03-03
  • Released Date: 2004-08-17
  • Deposition author(s): Zavala-Ruiz, Z., Strug, I., Walker, B.D., Norris, P.J., Stern, L.J.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4