1R6N

HPV11 E2 TAD complex crystal structure


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.266
  • R-Value Work: 0.209

Literature

Macromolecules
Sequence Display for 1R6N

Classification: TRANSCRIPTION REPLICATION

Total Structure Weight: 25817.97

Macromolecule Entities
Molecule Chains Length Organism Details
HPV11 REGULATORY PROTEIN E2 A 211 Alphapapillomavirus 10 Fragment: TRANSACTIVATION DOMAIN (RESIDUES 2-201)
Details: inhibited form
Gene Name(s): E2
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
434
Query on 434

A SPIRO[3-CARBOXY-4-{(4-[1,2,3]THIADIAZOL-4- YL-PHENYL)-AMINO-CARBONYL} -5-[3,4-DICHLORO- PHENYL]-TETRAHYDROFURAN-2,2'-5-METHYL-INDAN- 1,3-DIONE]
BILH 434 (Synonym)
C29 H19 Cl2 N3 O6 S
KNRVCCXHLSHTFW-HGPRPZRGSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ALQ
Query on ALQ

A 2-METHYL-PROPIONIC ACID
C4 H8 O2
KQNPFQTWMSNSAP-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
DMS
Query on DMS

A DIMETHYL SULFOXIDE
C2 H6 O S
IAZDPXIOMUYVGZ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
434 N/A in BindingDB
Kd: 40 nM  BindingMOAD
Kd: 40 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.266
  • R-Value Work: 0.209
  • Space Group: P 41

Unit Cell:

Length (Å) Angle (°)
a = 60.46 α = 90.00
b = 60.46 β = 90.00
c = 82.53 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-10-15
  • Released Date: 2004-02-24
  • Deposition author(s): Wang, Y., Coulombe, R.

Revision History

  • Version 1_0: 2004-02-24

    Type: Initial release

  • Version 1_1: 2008-04-29

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance