Crystal structure of wild type Lactococcus lactis Fpg complexed to a tetrahydrofuran containing DNA DOI:10.2210/pdb1pm5/pdb   NDB ID: PD0448

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Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: Hydrolase/dna Structure Weight: 39868.73 Molecule: DNA (5'-D(*CP*TP*CP*TP*TP*TP*(3DR)P*TP*TP*TP*CP*TP*CP*G)-3') Polymer: 1 Type: dna Length: 14 Chains: D Molecule: DNA (5'-D(*GP*CP*GP*AP*GP*AP*AP*AP*CP*AP*AP*AP*GP*A)-3') Polymer: 2 Type: dna Length: 14 Chains: E Molecule: Formamidopyrimidine-DNA glycosylase Polymer: 3 Type: protein Length: 271 Chains: A EC#: 3.2.2.23    4.2.99.18    Fragment: Fpg Organism Lactococcus lactis subsp. cremoris Gene Names mutM fpg UniProtKB:   Protein Feature View | Search PDB | P42371         Source Hide Polymer: 1 Scientific Name: Synthetic construct   Taxonomy     Polymer: 2 Scientific Name: Synthetic construct   Taxonomy     Polymer: 3 Scientific Name: Lactococcus lactis subsp. cremoris   Taxonomy   Expression System: Escherichia coli       Related PDB Entries Hide Identifier Details 1KFV    1NNJ        Ligand Chemical Component Hide Identifier Formula Name Interactions GOL Search  Download  C3 H8 O3 GLYCEROL   Ligand Explorer ZN Search  Download  Zn ZINC ION   Ligand Explorer     Modified Residues Hide Identifier Formula Parent Type 3DR Search  C5 H11 O6 P dnaLinking     External Domain Annotations Hide SCOP Classification v1.75: 3 Domains - data from SCOP   Pfam Classification: 3 Domains - data from Pfam   GO Terms: 12 Terms - data from GO      Structural Biology Knowledgebase Data Hide   Nucleic Acid Database Hide View the NDB ID associated with this structure: PD0448     Data in orange boxes are gathered from external resources (when available). Reset Layout

Biological Assembly            View in 3D More Images... Biological assembly 1 assigned by authors Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol QuickPDB FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Pereira de Jesus-Tran, K.,  Serre, L.,  Zelwer, C.,  Castaing, B. Deposition:   2003-06-10 Release:   2004-07-27 Last Modified (REVDAT):   2011-07-13     Revision History    Hide Mouse over text for details 2011-07-13 Version format compliance 2011-07-13 Non-polymer description     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data:   Structure Factors EDS   Resolution[Å]:   1.95 R-Value: 0.196 (work) R-Free: 0.216 Space Group: P 41 21 2 Unit Cell:   Length [Å] Angles [°] a = 91.78 α = 90.00  b = 91.78 β = 90.00  c = 141.79 γ = 90.00