Complex II (Succinate Dehydrogenase) From E. Coli with ubiquinone bound DOI:10.2210/pdb1nek/pdb

1NEK   Display Files  close FASTA Sequence PDB File PDB File (Header) mmCIF File mmCIF File (Header) PDBML/XML File PDBML/XML File (Header)   Download Files  close FASTA Sequence PDB File (Text) PDB File (gz) mmCIF File mmCIF File (gz) PDBML/XML File PDBML/XML File (gz) Biological Assembly 1 (gz) (A+S) Biological Assembly 2 (gz) (S) Biological Assembly 3 (gz) (S)   Share this Page  close Facebook Twitter LinkedIn Email Link this Page

Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: Oxidoreductase/electron Transport Structure Weight: 123108.48 Molecule: Succinate dehydrogenase flavoprotein subunit Polymer: 1 Type: protein Length: 588 Chains: A EC#: 1.3.99.1    Organism Escherichia coli Gene Names sdhA b0723 JW0713 UniProtKB:   Protein Feature View | Search PDB | P0AC41     Molecule: Succinate dehydrogenase iron-sulfur protein Polymer: 2 Type: protein Length: 238 Chains: B EC#: 1.3.99.1    Organism Escherichia coli Gene Names sdhB b0724 JW0714 UniProtKB:   Protein Feature View | Search PDB | P07014     Molecule: Succinate dehydrogenase cytochrome b-556 subunit Polymer: 3 Type: protein Length: 129 Chains: C Organism Escherichia coli Gene Names sdhC cybA b0721 JW0711 UniProtKB:   Protein Feature View | Search PDB | P69054     Molecule: Succinate dehydrogenase hydrophobic membrane anchor protein Polymer: 4 Type: protein Length: 115 Chains: D Organism Escherichia coli Gene Names sdhD b0722 JW0712 UniProtKB:   Protein Feature View | Search PDB | P0AC44         Source Hide Polymer: 1 Scientific Name: Escherichia coli   Taxonomy   Expression System: Escherichia coli   Polymer: 2 Scientific Name: Escherichia coli   Taxonomy   Expression System: Escherichia coli   Polymer: 3 Scientific Name: Escherichia coli   Taxonomy   Expression System: Escherichia coli   Polymer: 4 Scientific Name: Escherichia coli   Taxonomy   Expression System: Escherichia coli       Related PDB Entries Hide Identifier Details 1nen        Ligand Chemical Component Hide Identifier Formula Name Interactions CA Search  Download  Ca CALCIUM ION   Ligand Explorer CDN Search  Download  C58 H120 O17 P2 CARDIOLIPIN   Ligand Explorer EPH Search  Download  C39 H68 N O8 P L-ALPHA-PHOSPHATIDYL-BETA-OLEOYL-GAMMA-PALMITOYL- PHOSPHATIDYLETHANOLAMINE   Ligand Explorer F3S Search  Download  Fe3 S4 FE3-S4 CLUSTER   Ligand Explorer FAD Search  Download  C27 H33 N9 O15 P2 FLAVIN-ADENINE DINUCLEOTIDE   Ligand Explorer FES Search  Download  Fe2 S2 FE2/S2 (INORGANIC) CLUSTER   Ligand Explorer HEM Search  Download  C34 H32 Fe N4 O4 PROTOPORPHYRIN IX CONTAINING FE   Ligand Explorer OAA Search  Download  C4 H3 O5 OXALOACETATE ION   Ligand Explorer SF4 Search  Download  Fe4 S4 IRON/SULFUR CLUSTER   Ligand Explorer UQ2 Search  Download  C19 H26 O4 UBIQUINONE-2   Ligand Explorer     External Domain Annotations Hide SCOP Classification v1.75: 7 Domains - data from SCOP   CATH Classification v3.4.0: 8 Domains - data from CATH   Pfam Classification: 8 Domains - data from Pfam   GO Terms: 55 Terms - data from GO      Structural Biology Knowledgebase Data Hide     Data in orange boxes are gathered from external resources (when available). Reset Layout

Biological Assembly 1            View in 3D More Images... Biological assembly 1 assigned by authors and generated by PISA (software)Biological assembly 2 generated by PISA (software)Biological assembly 3 generated by PISA (software) Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol QuickPDB FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Yankovskaya, V.,  Horsefield, R.,  Tornroth, S.,  Luna-Chavez, C.,  Miyoshi, H.,  Leger, C.,  Byrne, B.,  Cecchini, G.,  Iwata, S. Deposition:   2002-12-11 Release:   2003-02-25 Last Modified (REVDAT):   2009-03-31     Revision History    Hide Mouse over text for details 2011-07-13 Version format compliance     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data: N/A Resolution[Å]:   2.60 R-Value: 0.247 (obs.) R-Free: 0.289 Space Group: H 3 2 Unit Cell:   Length [Å] Angles [°] a = 138.80 α = 90.00  b = 138.80 β = 90.00  c = 521.90 γ = 120.00      Molecule of the Month Hide Citric Acid Cycle