1K12
Fucose Binding lectin
- PDB DOI: https://doi.org/10.2210/pdb1K12/pdb
- Classification: SUGAR BINDING PROTEIN
- Organism(s): Anguilla anguilla
- Mutation(s): No 
- Deposited: 2001-09-23 Released: 2002-07-31 
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.90 Å
- R-Value Free: 0.239 
- R-Value Work: 0.190 
- R-Value Observed: 0.190 
This is version 1.3 of the entry. See complete history. 
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
LECTIN | 158 | Anguilla anguilla | Mutation(s): 0  | ||
UniProt | |||||
Find proteins for Q7SIC1 (Anguilla anguilla) Explore Q7SIC1  Go to UniProtKB:  Q7SIC1 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q7SIC1 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
Ligands 3 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
FUC Query on FUC | B [auth A] | alpha-L-fucopyranose C6 H12 O5 SHZGCJCMOBCMKK-SXUWKVJYSA-N | |||
CA Query on CA | C [auth A] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N | |||
CL Query on CL | D [auth A] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.90 Å
- R-Value Free: 0.239 
- R-Value Work: 0.190 
- R-Value Observed: 0.190 
- Space Group: H 3 2
Unit Cell:
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 65.54 | α = 90 |
b = 65.54 | β = 90 |
c = 245.136 | γ = 120 |
Software Name | Purpose |
---|---|
CrystalClear | data collection |
CrystalClear | data reduction |
MLPHARE | phasing |
DM | model building |
CNS | refinement |
CrystalClear | data scaling |
DM | phasing |
Entry History 
Deposition Data
- Released Date: 2002-07-31  Deposition Author(s): Bianchet, M.A., Odom, E.W., Vasta, G.R., Amzel, L.M.
Revision History (Full details and data files)
- Version 1.0: 2002-07-31
Type: Initial release - Version 1.1: 2008-04-27
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Version format compliance - Version 1.3: 2020-07-29
Type: Remediation
Reason: Carbohydrate remediation
Changes: Data collection, Derived calculations, Refinement description, Structure summary