DNA G-Quartets in a 1.86 A Resolution Structure of an Oxytricha nova Telomeric Protein-DNA Complex DOI:10.2210/pdb1jb7/pdb   NDB ID: PD0218

1JB7   Display Files  close FASTA Sequence PDB File PDB File (Header) mmCIF File mmCIF File (Header) PDBML/XML File PDBML/XML File (Header)   Download Files  close FASTA Sequence PDB File (Text) PDB File (gz) mmCIF File mmCIF File (gz) PDBML/XML File PDBML/XML File (gz) Structure Factor (Text) Structure Factor (gz) Biological Assembly (gz) (A)   Share this Page  close Facebook Twitter LinkedIn Email Link this Page

Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: DNA Binding Protein/dna Structure Weight: 96429.78 Molecule: 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*G)-3' Polymer: 1 Type: dna Length: 12 Chains: D, G, H Details: Chain D is single strand DNA. Chains G and H are a G-quartet linked DNA dimer Molecule: telomere-binding protein alpha subunit Polymer: 2 Type: protein Length: 495 Chains: A Details: alanine version Organism Sterkiella nova Gene Names MAC-56A MAC-56K MAC-56S UniProtKB:   Protein Feature View | Search PDB | P29549     Molecule: telomere-binding protein beta subunit Polymer: 3 Type: protein Length: 260 Chains: B Fragment: 28 kDa N-terminal core Organism Sterkiella nova Gene Names MAC-41A MAC-41S UniProtKB:   Protein Feature View | Search PDB | P16458         Source Hide Polymer: 1 Scientific Name: Synthetic construct   Taxonomy     Polymer: 2 Scientific Name: Sterkiella nova   Taxonomy   Expression System: Escherichia coli   Polymer: 3 Scientific Name: Sterkiella nova   Taxonomy   Expression System: Escherichia coli       Related PDB Entries Hide Identifier Details 156d  Refined solution structure of the dimeric quadruplex formed from the Oxytricha telomeric oligonucleotide  1otc  Crystal structure of the Oxytricha nova telomere end binding protein complexed with ssDNA to 2.8 A resolution      Ligand Chemical Component Hide Identifier Formula Name Interactions CL Search  Download  Cl CHLORIDE ION   Ligand Explorer NA Search  Download  Na SODIUM ION   Ligand Explorer     External Domain Annotations Hide SCOP Classification v1.75: 4 Domains - data from SCOP   CATH Classification v3.4.0: 4 Domains - data from CATH   Pfam Classification: 4 Domains - data from Pfam   GO Terms: 12 Terms - data from GO      Structural Biology Knowledgebase Data Hide   Nucleic Acid Database Hide View the NDB ID associated with this structure: PD0218     Data in orange boxes are gathered from external resources (when available). Reset Layout

Biological Assembly            View in 3D More Images... Biological assembly 1 assigned by authors Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol QuickPDB FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Horvath, M.P.,  Schultz, S.C. Deposition:   2001-06-02 Release:   2001-06-11 Last Modified (REVDAT):   2011-11-16     Revision History    Hide Mouse over text for details 2011-11-16 Atom occupancy 2011-07-13 Version format compliance     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data:   Structure Factors EDS   Resolution[Å]:   1.86 R-Value: 0.232 (obs.) R-Free: 0.246 Space Group: P 61 2 2 Unit Cell:   Length [Å] Angles [°] a = 93.10 α = 90.00  b = 93.10 β = 90.00  c = 421.80 γ = 120.00