1EJ7

CRYSTAL STRUCTURE OF UNACTIVATED TOBACCO RUBISCO WITH BOUND PHOSPHATE IONS

Structural Biology Knowledgebase: 1EJ7 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.45 Å
  • R-Value Free: 0.197
  • R-Value Work: 0.149

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1EJ7

Classification: LYASE

Total Structure Weight: 67594.02

Macromolecule Entities
Molecule Chains Length Organism Details
RUBISCO (LARGE SUBUNIT) L 475 Nicotiana tabacum EC#: 4.1.1.39 IUBMB
Mutation: E19D, E377V
Gene Name(s): rbcL rbcA
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
RUBISCO (SMALL SUBUNIT) S 123 Nicotiana tabacum EC#: 4.1.1.39 IUBMB
Gene Name(s): RBCS
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PO4
Query on PO4

L PHOSPHATE ION
O4 P
NBIIXXVUZAFLBC-UHFFFAOYSA-K
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.45 Å
  • R-Value Free: 0.197
  • R-Value Work: 0.149
  • Space Group: I 4 2 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 149.18 α = 90.00
b = 149.18 β = 90.00
c = 138.34 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-03-01
  • Released Date: 2000-03-15
  • Deposition author(s): Duff, A.P., Andrews, T.J., Curmi, P.M.G.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Biological assembly | Details: Added software calculated values