1DUG

STRUCTURE OF THE FIBRINOGEN G CHAIN INTEGRIN BINDING AND FACTOR XIIIA CROSSLINKING SITES OBTAINED THROUGH CARRIER PROTEIN DRIVEN CRYSTALLIZATION

Structural Biology Knowledgebase: 1DUG SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.226
  • R-Value Work: 0.185

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1DUG

Classification: transferase blood clotting

Total Structure Weight: 54881.64

Macromolecule Entities
Molecule Chains Length Organism Details
chimera of GLUTATHIONE S-TRANSFERASE-synthetic LINKEr-C-TERMINAL FIBRINOGEN GAMMA CHAIN A, B 234 Schistosoma japonicum EC#: 2.5.1.18 IUBMB
Details: GLUTATHIONE S-TRANSFERASE (residues 1-217) bound to synthetic SDP linker (residues 218-220) bound to C-TERMINAL FIBRINOGEN GAMMA CHAIN (residues 221-234)
Gene Name(s): FGG Gene View PRO2061

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GSH
Query on GSH

A, B GLUTATHIONE
C10 H17 N3 O6 S
RWSXRVCMGQZWBV-WDSKDSINSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.226
  • R-Value Work: 0.185
  • Space Group: P 41 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 105.78 α = 90.00
b = 105.78 β = 90.00
c = 137.23 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-01-17
  • Released Date: 2000-02-02
  • Deposition author(s): Ware, S., Donahue, J.P., Hawiger, J., Anderson, W.F.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4