1ZTF

Crystal Structure of A.fulgidus Rio1 serine protein kinase

Structural Biology Knowledgebase: 1ZTF SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.99 Å
  • R-Value Free: 0.236
  • R-Value Work: 0.163

Literature

Macromolecules
Sequence Display for 1ZTF

Classification: Transferase

Total Structure Weight: 30921.02

Macromolecule Entities
Molecule Chains Length Organism Details
Rio1 serine protein kinase A 258 Archaeoglobus fulgidus EC#: 2.7.11.1 IUBMB
Mutation: M1M, M51M, M77M, M92M, M104M, M141M, M147M, M203M, M213M, M223M, M251M
Gene Name(s): rio1 AF_1804
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
XYA
Query on XYA

A 2-(6-AMINO-OCTAHYDRO-PURIN-9-YL)-5-HYDROXYMETHYL- TETRAHYDRO-FURAN-3,4-DIOL
9-BETA-D-XYLOFURANOSYL-ADENINE (Synonym)
C10 H13 N5 O4
OIRDTQYFTABQOQ-GAWUUDPSSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.99 Å
  • R-Value Free: 0.236
  • R-Value Work: 0.163
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 42.99 α = 90.00
b = 52.70 β = 108.89
c = 63.78 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2005-05-26
  • Released Date: 2005-07-19
  • Deposition author(s): Wlodawer, A., LaRonde-LeBlanc, N.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4