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Structure of a Synaptic gamma-delta Resolvase Tetramer Covalently Linked to two Cleaved DNAs
DOI:10.2210/pdb1zr2/pdb   NDB ID: PD0665
1ZR2
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Recombination/dna
    Structure Weight: 62049.46
    Molecule: TCAGTGTCCGATAATTTAT
    Polymer: 1 Type: dna Length: 19
    Chains: J, X
    Molecule: AAA
    Polymer: 2 Type: dna Length: 3
    Chains: I, Z
    Molecule: TTATCGGACACTG
    Polymer: 3 Type: dna Length: 13
    Chains: K, Y
    Molecule: Transposon gamma-delta resolvase
    Polymer: 4 Type: protein Length: 183
    Chains: A, B
    Mutation: R2A, E56K, G101S, E102Y, M103I, E124Q
    Details: activated gamma-delta resolvase mutant
    Organism: Escherichia coli
    Gene Names: tnpR ECOK12F009
    UniProtKB: Protein Feature View | Search PDB | P03012  
     
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  •   Source Hide
    Polymer: 1
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 2
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 3
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 4
    Scientific Name: Escherichia coli   Taxonomy   Expression System: Escherichia coli bl21(de3)  
     
  •   Related PDB Entries Hide
    Identifier Details
    1GDR   
    1GDT   
    2RSL   
     
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  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure: PD0665
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors
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  •   Deposition Summary Hide
    Authors:   Li, W.,  Kamtekar, S.,  Xiong, Y.,  Sarkis, G.J.,  Grindley, N.D.,  Steitz, T.A.

    Deposition:   2005-05-18
    Release:   2005-08-30
    Last Modified (REVDAT):   2011-07-13
     
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    2011-07-13
    Version format compliance
    2011-07-13
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  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    Resolution[Å]:   3.90
    R-Value: 0.270 (obs.)
    R-Free: 0.322
    Space Group: P 32 2 1
    Unit Cell:
      Length [Å] Angles [°]
    a = 125.05 α = 90.00 
    b = 125.05 β = 90.00 
    c = 127.39 γ = 120.00